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Q4UMS1 (RL29_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L29
Gene names
Name:rpmC
Ordered Locus Names:RF_0286
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length71 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L29P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 717150S ribosomal protein L29 HAMAP-Rule MF_00374
PRO_0000130443

Sequences

Sequence LengthMass (Da)Tools
Q4UMS1 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: D3D06C34DA617C3E

FASTA718,406
        10         20         30         40         50         60 
MNDLKLLRSK LSTETIEELY KNLNLLKKEL FNLRFQQALG ELKNTSRFSL VKKSIARIKT 

        70 
ELTKRSNSEE Y 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61137.1.
RefSeqYP_246302.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UMS1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0286.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61137; AAY61137; RF_0286.
GeneID3400249.
KEGGrfe:RF_0286.
PATRIC17890984. VBIRicFel64634_0329.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0255.
HOGENOMHOG000248754.
KOK02904.
OMAMRANELQ.
OrthoDBEOG6VTK8Z.
ProtClustDBPRK00306.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-296-MONOMER.

Family and domain databases

Gene3D1.10.287.310. 1 hit.
HAMAPMF_00374. Ribosomal_L29.
InterProIPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]
PfamPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMSSF46561. SSF46561. 1 hit.
TIGRFAMsTIGR00012. L29. 1 hit.
PROSITEPS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL29_RICFE
AccessionPrimary (citable) accession number: Q4UMS1
Entry history
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: July 5, 2005
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries