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Q4UMS0

- RS17_RICFE

UniProt

Q4UMS0 - RS17_RICFE

Protein

30S ribosomal protein S17

Gene

rpsQ

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciRFEL315456:GKEK-297-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S17UniRule annotation
    Gene namesi
    Name:rpsQUniRule annotation
    Ordered Locus Names:RF_0287
    OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
    Taxonomic identifieri315456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000008548: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 828230S ribosomal protein S17PRO_0000233557Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi315456.RF_0287.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4UMS0.
    SMRiQ4UMS0. Positions 7-79.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S17P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0186.
    HOGENOMiHOG000231339.
    KOiK02961.
    OMAiVAVETYK.
    OrthoDBiEOG63JRH2.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    HAMAPiMF_01345_B. Ribosomal_S17_B.
    InterProiIPR012340. NA-bd_OB-fold.
    IPR000266. Ribosomal_S17.
    IPR019984. Ribosomal_S17_bac-type.
    IPR019979. Ribosomal_S17_CS.
    [Graphical view]
    PANTHERiPTHR10744. PTHR10744. 1 hit.
    PfamiPF00366. Ribosomal_S17. 1 hit.
    [Graphical view]
    PRINTSiPR00973. RIBOSOMALS17.
    ProDomiPD001295. Ribosomal_S17. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR03635. S17_bact. 1 hit.
    PROSITEiPS00056. RIBOSOMAL_S17. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4UMS0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRNIKMPKRV LQGVVISSKA DKTVTVKVER KFKHPIYKKF VKVSKKYAAH   50
    DSENKYQEGD KVSIIESRPI SKTKTWLVVN GE 82
    Length:82
    Mass (Da):9,475
    Last modified:July 5, 2005 - v1
    Checksum:i72481C28107784F8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61138.1.
    RefSeqiYP_246303.1. NC_007109.1.

    Genome annotation databases

    EnsemblBacteriaiAAY61138; AAY61138; RF_0287.
    GeneIDi3400250.
    KEGGirfe:RF_0287.
    PATRICi17890986. VBIRicFel64634_0330.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61138.1 .
    RefSeqi YP_246303.1. NC_007109.1.

    3D structure databases

    ProteinModelPortali Q4UMS0.
    SMRi Q4UMS0. Positions 7-79.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 315456.RF_0287.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY61138 ; AAY61138 ; RF_0287 .
    GeneIDi 3400250.
    KEGGi rfe:RF_0287.
    PATRICi 17890986. VBIRicFel64634_0330.

    Phylogenomic databases

    eggNOGi COG0186.
    HOGENOMi HOG000231339.
    KOi K02961.
    OMAi VAVETYK.
    OrthoDBi EOG63JRH2.

    Enzyme and pathway databases

    BioCyci RFEL315456:GKEK-297-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    HAMAPi MF_01345_B. Ribosomal_S17_B.
    InterProi IPR012340. NA-bd_OB-fold.
    IPR000266. Ribosomal_S17.
    IPR019984. Ribosomal_S17_bac-type.
    IPR019979. Ribosomal_S17_CS.
    [Graphical view ]
    PANTHERi PTHR10744. PTHR10744. 1 hit.
    Pfami PF00366. Ribosomal_S17. 1 hit.
    [Graphical view ]
    PRINTSi PR00973. RIBOSOMALS17.
    ProDomi PD001295. Ribosomal_S17. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR03635. S17_bact. 1 hit.
    PROSITEi PS00056. RIBOSOMAL_S17. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
      Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
      PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-1525 / URRWXCal2.

    Entry informationi

    Entry nameiRS17_RICFE
    AccessioniPrimary (citable) accession number: Q4UMS0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 2, 2006
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia felis (Rickettsia azadi)
      Rickettsia felis (strain URRWXCal2): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3