Q4UMS0 (RS17_RICFE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S17

Gene names

Name:	rpsQ
Ordered Locus Names:	RF_0287

Organism

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]

Taxonomic identifier

315456 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia felis

Protein attributes

Sequence length	82 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA By similarity. HAMAP-Rule MF_01345
Subunit structure	Part of the 30S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein S17P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 82	82	30S ribosomal protein S17 HAMAP-Rule MF_01345		PRO_0000233557

Sequences

	Sequence		Length	Mass (Da)
	Q4UMS0 [UniParc]. Last modified July 5, 2005. Version 1. Checksum: 72481C28107784F8	FASTA	82	9,475
	10 20 30 40 50 60 MRNIKMPKRV LQGVVISSKA DKTVTVKVER KFKHPIYKKF VKVSKKYAAH DSENKYQEGD 70 80 KVSIIESRPI SKTKTWLVVN GE

References

[1]

"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite." Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D. PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000053 Genomic DNA. Translation: AAY61138.1.
RefSeq	YP_246303.1. NC_007109.1.
3D structure databases
ProteinModelPortal	Q4UMS0.
SMR	Q4UMS0. Positions 7-79.
ModBase	Search...
Protein-protein interaction databases
STRING	315456.RF_0287.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAY61138; AAY61138; RF_0287.
GeneID	3400250.
KEGG	rfe:RF_0287.
PATRIC	17890986. VBIRicFel64634_0330.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0186.
HOGENOM	HOG000231339.
KO	K02961.
OMA	WIVVKDS.
ProtClustDB	PRK05610.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
HAMAP	MF_01345_B. Ribosomal_S17_B.
InterPro	IPR012340. NA-bd_OB-fold. IPR000266. Ribosomal_S17. IPR019984. Ribosomal_S17_bac-type. IPR019979. Ribosomal_S17_CS. [Graphical view]
PANTHER	PTHR10744. PTHR10744. 1 hit.
Pfam	PF00366. Ribosomal_S17. 1 hit. [Graphical view]
PRINTS	PR00973. RIBOSOMALS17.
ProDom	PD001295. Ribosomal_S17. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR03635. S17_bact. 1 hit.
PROSITE	PS00056. RIBOSOMAL_S17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS17_RICFE

Accession

Primary (citable) accession number: Q4UMS0

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 2, 2006
Last sequence update:	July 5, 2005
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program