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Q4UMR8 (RL24_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L24
Gene names
Name:rplX
Ordered Locus Names:RF_0289
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length109 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01326

One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity. HAMAP-Rule MF_01326

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01326

Sequence similarities

Belongs to the ribosomal protein L24P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 10910950S ribosomal protein L24 HAMAP-Rule MF_01326
PRO_0000241655

Sequences

Sequence LengthMass (Da)Tools
Q4UMR8 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 18ABAF8AB6451316

FASTA10911,848
        10         20         30         40         50         60 
MIKLKVKKGD EVVVITGKHK GKKGKILKVF PEDSKVIVSG VNLVKKHTKP NQMSEGGIIT 

        70         80         90        100 
KELPIHISNI AHIDPKTGNP TKVAFKFLED GSKVRVAKKS GEIIGKEGK 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61140.1.
RefSeqYP_246305.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UMR8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0289.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61140; AAY61140; RF_0289.
GeneID3400252.
KEGGrfe:RF_0289.
PATRIC17890990. VBIRicFel64634_0332.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0198.
HOGENOMHOG000039891.
KOK02895.
OMAVIQAYPA.
OrthoDBEOG6FFSDM.
ProtClustDBPRK00004.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-299-MONOMER.

Family and domain databases

Gene3D2.30.30.30. 1 hit.
HAMAPMF_01326_B. Ribosomal_L24_B.
InterProIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERPTHR12903. PTHR12903. 1 hit.
PfamPF00467. KOW. 1 hit.
[Graphical view]
SMARTSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMSSF50104. SSF50104. 1 hit.
TIGRFAMsTIGR01079. rplX_bact. 1 hit.
PROSITEPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL24_RICFE
AccessionPrimary (citable) accession number: Q4UMR8
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2005
Last modified: February 19, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries