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Q4UM12

- 3MGH_RICFE

UniProt

Q4UM12 - 3MGH_RICFE

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Protein

Putative 3-methyladenine DNA glycosylase

Gene

RF_0560

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. alkylbase DNA N-glycosylase activity Source: InterPro
  2. DNA binding Source: InterPro

GO - Biological processi

  1. base-excision repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

DNA damage, DNA repair

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-574-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative 3-methyladenine DNA glycosylaseUniRule annotation (EC:3.2.2.-UniRule annotation)
Gene namesi
Ordered Locus Names:RF_0560
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 177177Putative 3-methyladenine DNA glycosylasePRO_0000265055Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0560.

Structurei

3D structure databases

ProteinModelPortaliQ4UM12.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DNA glycosylase MPG family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2094.
HOGENOMiHOG000224224.
KOiK03652.
OMAiSYVYFIY.
OrthoDBiEOG6Q2SQ1.

Family and domain databases

Gene3Di3.10.300.10. 1 hit.
HAMAPiMF_00527. 3MGH.
InterProiIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERiPTHR10429. PTHR10429. 1 hit.
PfamiPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMiSSF50486. SSF50486. 1 hit.
TIGRFAMsiTIGR00567. 3mg. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UM12-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNKLILLPRE FFARDTNLVS TELIGKVLYF QGKTAIITET ESYIGQDDPA
60 70 80 90 100
CHAARGRTKR TDIMFGPAGF SYVYLIYGMY YCLNFVTETE GFPAATLIRG
110 120 130 140 150
VHVISPENLY LNGPGKLCKY LGINISHNKC DLINNNEFFV SDIGLKLPYS
160 170
TTTRIGITKG TDKLWRYVVT DIIRLPA
Length:177
Mass (Da):19,932
Last modified:July 5, 2005 - v1
Checksum:iE2D06F077B35F3C8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY61411.1.
RefSeqiWP_011270892.1. NC_007109.1.
YP_246576.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61411; AAY61411; RF_0560.
GeneIDi3400339.
KEGGirfe:RF_0560.
PATRICi17891669. VBIRicFel64634_0667.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY61411.1 .
RefSeqi WP_011270892.1. NC_007109.1.
YP_246576.1. NC_007109.1.

3D structure databases

ProteinModelPortali Q4UM12.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 315456.RF_0560.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY61411 ; AAY61411 ; RF_0560 .
GeneIDi 3400339.
KEGGi rfe:RF_0560.
PATRICi 17891669. VBIRicFel64634_0667.

Phylogenomic databases

eggNOGi COG2094.
HOGENOMi HOG000224224.
KOi K03652.
OMAi SYVYFIY.
OrthoDBi EOG6Q2SQ1.

Enzyme and pathway databases

BioCyci RFEL315456:GKEK-574-MONOMER.

Family and domain databases

Gene3Di 3.10.300.10. 1 hit.
HAMAPi MF_00527. 3MGH.
InterProi IPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view ]
PANTHERi PTHR10429. PTHR10429. 1 hit.
Pfami PF02245. Pur_DNA_glyco. 1 hit.
[Graphical view ]
SUPFAMi SSF50486. SSF50486. 1 hit.
TIGRFAMsi TIGR00567. 3mg. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry namei3MGH_RICFE
AccessioniPrimary (citable) accession number: Q4UM12
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2005
Last modified: October 29, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3