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Protein

Putative 3-methyladenine DNA glycosylase

Gene

RF_0560

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

DNA damage, DNA repair

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-574-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative 3-methyladenine DNA glycosylaseUniRule annotation (EC:3.2.2.-UniRule annotation)
Gene namesi
Ordered Locus Names:RF_0560
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 177177Putative 3-methyladenine DNA glycosylasePRO_0000265055Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0560.

Structurei

3D structure databases

ProteinModelPortaliQ4UM12.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DNA glycosylase MPG family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2094.
HOGENOMiHOG000224224.
KOiK03652.
OMAiSYVYFIY.
OrthoDBiEOG6Q2SQ1.

Family and domain databases

Gene3Di3.10.300.10. 1 hit.
HAMAPiMF_00527. 3MGH.
InterProiIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERiPTHR10429. PTHR10429. 1 hit.
PfamiPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMiSSF50486. SSF50486. 1 hit.
TIGRFAMsiTIGR00567. 3mg. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UM12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKLILLPRE FFARDTNLVS TELIGKVLYF QGKTAIITET ESYIGQDDPA
60 70 80 90 100
CHAARGRTKR TDIMFGPAGF SYVYLIYGMY YCLNFVTETE GFPAATLIRG
110 120 130 140 150
VHVISPENLY LNGPGKLCKY LGINISHNKC DLINNNEFFV SDIGLKLPYS
160 170
TTTRIGITKG TDKLWRYVVT DIIRLPA
Length:177
Mass (Da):19,932
Last modified:July 5, 2005 - v1
Checksum:iE2D06F077B35F3C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61411.1.
RefSeqiWP_011270892.1. NC_007109.1.
YP_246576.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61411; AAY61411; RF_0560.
KEGGirfe:RF_0560.
PATRICi17891669. VBIRicFel64634_0667.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61411.1.
RefSeqiWP_011270892.1. NC_007109.1.
YP_246576.1. NC_007109.1.

3D structure databases

ProteinModelPortaliQ4UM12.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi315456.RF_0560.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY61411; AAY61411; RF_0560.
KEGGirfe:RF_0560.
PATRICi17891669. VBIRicFel64634_0667.

Phylogenomic databases

eggNOGiCOG2094.
HOGENOMiHOG000224224.
KOiK03652.
OMAiSYVYFIY.
OrthoDBiEOG6Q2SQ1.

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-574-MONOMER.

Family and domain databases

Gene3Di3.10.300.10. 1 hit.
HAMAPiMF_00527. 3MGH.
InterProiIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERiPTHR10429. PTHR10429. 1 hit.
PfamiPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMiSSF50486. SSF50486. 1 hit.
TIGRFAMsiTIGR00567. 3mg. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry namei3MGH_RICFE
AccessioniPrimary (citable) accession number: Q4UM12
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2005
Last modified: May 27, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.