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Q4UM12 (3MGH_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative 3-methyladenine DNA glycosylase

EC=3.2.2.-
Gene names
Ordered Locus Names:RF_0560
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length177 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DNA glycosylase MPG family.

Ontologies

Keywords
   Biological processDNA damage
DNA repair
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbase-excision repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

alkylbase DNA N-glycosylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 177177Putative 3-methyladenine DNA glycosylase HAMAP-Rule MF_00527
PRO_0000265055

Sequences

Sequence LengthMass (Da)Tools
Q4UM12 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: E2D06F077B35F3C8

FASTA17719,932
        10         20         30         40         50         60 
MNKLILLPRE FFARDTNLVS TELIGKVLYF QGKTAIITET ESYIGQDDPA CHAARGRTKR 

        70         80         90        100        110        120 
TDIMFGPAGF SYVYLIYGMY YCLNFVTETE GFPAATLIRG VHVISPENLY LNGPGKLCKY 

       130        140        150        160        170 
LGINISHNKC DLINNNEFFV SDIGLKLPYS TTTRIGITKG TDKLWRYVVT DIIRLPA 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61411.1.
RefSeqYP_246576.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UM12.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0560.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61411; AAY61411; RF_0560.
GeneID3400339.
KEGGrfe:RF_0560.
PATRIC17891669. VBIRicFel64634_0667.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2094.
HOGENOMHOG000224224.
KOK03652.
OMACTPRIGI.
OrthoDBEOG6Q2SQ1.
ProtClustDBPRK00802.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-574-MONOMER.

Family and domain databases

Gene3D3.10.300.10. 1 hit.
HAMAPMF_00527. 3MGH.
InterProIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERPTHR10429. PTHR10429. 1 hit.
PfamPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMSSF50486. SSF50486. 1 hit.
TIGRFAMsTIGR00567. 3mg. 1 hit.
ProtoNetSearch...

Entry information

Entry name3MGH_RICFE
AccessionPrimary (citable) accession number: Q4UM12
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2005
Last modified: February 19, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names