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Q4UM12

- 3MGH_RICFE

UniProt

Q4UM12 - 3MGH_RICFE

Protein

Putative 3-methyladenine DNA glycosylase

Gene

RF_0560

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (05 Jul 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alkylbase DNA N-glycosylase activity Source: InterPro
    2. DNA binding Source: InterPro

    GO - Biological processi

    1. base-excision repair Source: InterPro

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    DNA damage, DNA repair

    Enzyme and pathway databases

    BioCyciRFEL315456:GKEK-574-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative 3-methyladenine DNA glycosylaseUniRule annotation (EC:3.2.2.-UniRule annotation)
    Gene namesi
    Ordered Locus Names:RF_0560
    OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
    Taxonomic identifieri315456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000008548: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 177177Putative 3-methyladenine DNA glycosylasePRO_0000265055Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi315456.RF_0560.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4UM12.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the DNA glycosylase MPG family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2094.
    HOGENOMiHOG000224224.
    KOiK03652.
    OMAiSYVYFIY.
    OrthoDBiEOG6Q2SQ1.

    Family and domain databases

    Gene3Di3.10.300.10. 1 hit.
    HAMAPiMF_00527. 3MGH.
    InterProiIPR011034. Formyl_transferase_C-like.
    IPR003180. PurDNA_glycsylse.
    [Graphical view]
    PANTHERiPTHR10429. PTHR10429. 1 hit.
    PfamiPF02245. Pur_DNA_glyco. 1 hit.
    [Graphical view]
    SUPFAMiSSF50486. SSF50486. 1 hit.
    TIGRFAMsiTIGR00567. 3mg. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4UM12-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNKLILLPRE FFARDTNLVS TELIGKVLYF QGKTAIITET ESYIGQDDPA    50
    CHAARGRTKR TDIMFGPAGF SYVYLIYGMY YCLNFVTETE GFPAATLIRG 100
    VHVISPENLY LNGPGKLCKY LGINISHNKC DLINNNEFFV SDIGLKLPYS 150
    TTTRIGITKG TDKLWRYVVT DIIRLPA 177
    Length:177
    Mass (Da):19,932
    Last modified:July 5, 2005 - v1
    Checksum:iE2D06F077B35F3C8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61411.1.
    RefSeqiYP_246576.1. NC_007109.1.

    Genome annotation databases

    EnsemblBacteriaiAAY61411; AAY61411; RF_0560.
    GeneIDi3400339.
    KEGGirfe:RF_0560.
    PATRICi17891669. VBIRicFel64634_0667.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61411.1 .
    RefSeqi YP_246576.1. NC_007109.1.

    3D structure databases

    ProteinModelPortali Q4UM12.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 315456.RF_0560.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY61411 ; AAY61411 ; RF_0560 .
    GeneIDi 3400339.
    KEGGi rfe:RF_0560.
    PATRICi 17891669. VBIRicFel64634_0667.

    Phylogenomic databases

    eggNOGi COG2094.
    HOGENOMi HOG000224224.
    KOi K03652.
    OMAi SYVYFIY.
    OrthoDBi EOG6Q2SQ1.

    Enzyme and pathway databases

    BioCyci RFEL315456:GKEK-574-MONOMER.

    Family and domain databases

    Gene3Di 3.10.300.10. 1 hit.
    HAMAPi MF_00527. 3MGH.
    InterProi IPR011034. Formyl_transferase_C-like.
    IPR003180. PurDNA_glycsylse.
    [Graphical view ]
    PANTHERi PTHR10429. PTHR10429. 1 hit.
    Pfami PF02245. Pur_DNA_glyco. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50486. SSF50486. 1 hit.
    TIGRFAMsi TIGR00567. 3mg. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
      Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
      PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-1525 / URRWXCal2.

    Entry informationi

    Entry namei3MGH_RICFE
    AccessioniPrimary (citable) accession number: Q4UM12
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia felis (Rickettsia azadi)
      Rickettsia felis (strain URRWXCal2): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3