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Protein

Putative membrane protein insertion efficiency factor

Gene

RF_0562

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Could be involved in insertion of integral membrane proteins into the membrane.UniRule annotation

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-576-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative membrane protein insertion efficiency factorUniRule annotation
Gene namesi
Ordered Locus Names:RF_0562
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548 Componenti: Chromosome

Subcellular locationi

  • Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Cytoplasmic side UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8282Putative membrane protein insertion efficiency factorPRO_0000253159Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0562.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0161 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0759.
HOGENOMiHOG000231600.
KOiK08998.
OMAiKCHPFNP.
OrthoDBiEOG61ZTN6.

Family and domain databases

HAMAPiMF_00386. UPF0161_YidD.
InterProiIPR002696. Membr_insert_effic_factor.
[Graphical view]
PfamiPF01809. Haemolytic. 1 hit.
[Graphical view]
ProDomiPD004225. DUF37. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00278. TIGR00278. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UM10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRILLLLLR FYQYFISPLL GNNCRFHPTC SEYAKEAITT HGTLKGLWLT
60 70 80
FKRIIKCQPF CNGGYDAVPL SIKNSKLFNK KI
Length:82
Mass (Da):9,499
Last modified:July 5, 2005 - v1
Checksum:i7F45C1A9B99FD594
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61413.1.
RefSeqiWP_011270894.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61413; AAY61413; RF_0562.
KEGGirfe:RF_0562.
PATRICi17891673. VBIRicFel64634_0669.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61413.1.
RefSeqiWP_011270894.1. NC_007109.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi315456.RF_0562.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY61413; AAY61413; RF_0562.
KEGGirfe:RF_0562.
PATRICi17891673. VBIRicFel64634_0669.

Phylogenomic databases

eggNOGiCOG0759.
HOGENOMiHOG000231600.
KOiK08998.
OMAiKCHPFNP.
OrthoDBiEOG61ZTN6.

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-576-MONOMER.

Family and domain databases

HAMAPiMF_00386. UPF0161_YidD.
InterProiIPR002696. Membr_insert_effic_factor.
[Graphical view]
PfamiPF01809. Haemolytic. 1 hit.
[Graphical view]
ProDomiPD004225. DUF37. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00278. TIGR00278. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry nameiYIDD_RICFE
AccessioniPrimary (citable) accession number: Q4UM10
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: July 5, 2005
Last modified: July 22, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.