Q4UM10 (YIDD_RICFE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative membrane protein insertion efficiency factor

Gene names

Ordered Locus Names:

RF_0562

Organism

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]

Taxonomic identifier

315456 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia felis

Protein attributes

Sequence length	82 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Could be involved in insertion of integral membrane proteins into the membrane By similarity. HAMAP-Rule MF_00386
Subcellular location	Cell inner membrane; Peripheral membrane protein; Cytoplasmic side By similarity HAMAP-Rule MF_00386.
Sequence similarities	Belongs to the UPF0161 family.

Ontologies

Keywords
Cellular component	Cell inner membrane Cell membrane Membrane
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 82	82	Putative membrane protein insertion efficiency factor HAMAP-Rule MF_00386		PRO_0000253159

Sequences

	Sequence		Length	Mass (Da)
	Q4UM10 [UniParc]. Last modified July 5, 2005. Version 1. Checksum: 7F45C1A9B99FD594	FASTA	82	9,499
	10 20 30 40 50 60 MTRILLLLLR FYQYFISPLL GNNCRFHPTC SEYAKEAITT HGTLKGLWLT FKRIIKCQPF 70 80 CNGGYDAVPL SIKNSKLFNK KI

References

[1]

"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite." Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D. PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000053 Genomic DNA. Translation: AAY61413.1.
RefSeq	YP_246578.1. NC_007109.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	315456.RF_0562.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAY61413; AAY61413; RF_0562.
GeneID	3400341.
KEGG	rfe:RF_0562.
PATRIC	17891673. VBIRicFel64634_0669.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0759.
HOGENOM	HOG000231600.
KO	K08998.
OMA	HPERYED.
ProtClustDB	PRK14388.
Family and domain databases
HAMAP	MF_00386. UPF0161_YidD.
InterPro	IPR002696. Membr_insert_effic_factor. [Graphical view]
Pfam	PF01809. Haemolytic. 1 hit. [Graphical view]
ProDom	PD004225. DUF37. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00278. TIGR00278. 1 hit.
ProtoNet	Search...

Entry information

Entry name

YIDD_RICFE

Accession

Primary (citable) accession number: Q4UM10

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 17, 2006
Last sequence update:	July 5, 2005
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program