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Q4UM10

- YIDD_RICFE

UniProt

Q4UM10 - YIDD_RICFE

Protein

Putative membrane protein insertion efficiency factor

Gene

RF_0562

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Functioni

    Could be involved in insertion of integral membrane proteins into the membrane.UniRule annotation

    Enzyme and pathway databases

    BioCyciRFEL315456:GKEK-576-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative membrane protein insertion efficiency factorUniRule annotation
    Gene namesi
    Ordered Locus Names:RF_0562
    OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
    Taxonomic identifieri315456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000008548: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Cytoplasmic side UniRule annotation

    GO - Cellular componenti

    1. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8282Putative membrane protein insertion efficiency factorPRO_0000253159Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi315456.RF_0562.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the UPF0161 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0759.
    HOGENOMiHOG000231600.
    KOiK08998.
    OMAiMSVWRIL.
    OrthoDBiEOG61ZTN6.

    Family and domain databases

    HAMAPiMF_00386. UPF0161_YidD.
    InterProiIPR002696. Membr_insert_effic_factor.
    [Graphical view]
    PfamiPF01809. Haemolytic. 1 hit.
    [Graphical view]
    ProDomiPD004225. DUF37. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    TIGRFAMsiTIGR00278. TIGR00278. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4UM10-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTRILLLLLR FYQYFISPLL GNNCRFHPTC SEYAKEAITT HGTLKGLWLT   50
    FKRIIKCQPF CNGGYDAVPL SIKNSKLFNK KI 82
    Length:82
    Mass (Da):9,499
    Last modified:July 5, 2005 - v1
    Checksum:i7F45C1A9B99FD594
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61413.1.
    RefSeqiYP_246578.1. NC_007109.1.

    Genome annotation databases

    EnsemblBacteriaiAAY61413; AAY61413; RF_0562.
    GeneIDi3400341.
    KEGGirfe:RF_0562.
    PATRICi17891673. VBIRicFel64634_0669.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61413.1 .
    RefSeqi YP_246578.1. NC_007109.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 315456.RF_0562.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY61413 ; AAY61413 ; RF_0562 .
    GeneIDi 3400341.
    KEGGi rfe:RF_0562.
    PATRICi 17891673. VBIRicFel64634_0669.

    Phylogenomic databases

    eggNOGi COG0759.
    HOGENOMi HOG000231600.
    KOi K08998.
    OMAi MSVWRIL.
    OrthoDBi EOG61ZTN6.

    Enzyme and pathway databases

    BioCyci RFEL315456:GKEK-576-MONOMER.

    Family and domain databases

    HAMAPi MF_00386. UPF0161_YidD.
    InterProi IPR002696. Membr_insert_effic_factor.
    [Graphical view ]
    Pfami PF01809. Haemolytic. 1 hit.
    [Graphical view ]
    ProDomi PD004225. DUF37. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    TIGRFAMsi TIGR00278. TIGR00278. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
      Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
      PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-1525 / URRWXCal2.

    Entry informationi

    Entry nameiYIDD_RICFE
    AccessioniPrimary (citable) accession number: Q4UM10
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 17, 2006
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia felis (Rickettsia azadi)
      Rickettsia felis (strain URRWXCal2): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families
    3. Uncharacterized protein families (UPF)
      List of uncharacterized protein family (UPF) entries

    External Data

    Dasty 3