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Q4UM10 (YIDD_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative membrane protein insertion efficiency factor
Gene names
Ordered Locus Names:RF_0562
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length82 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Could be involved in insertion of integral membrane proteins into the membrane By similarity. HAMAP-Rule MF_00386

Subcellular location

Cell inner membrane; Peripheral membrane protein; Cytoplasmic side By similarity HAMAP-Rule MF_00386.

Sequence similarities

Belongs to the UPF0161 family.

Ontologies

Keywords
   Cellular componentCell inner membrane
Cell membrane
Membrane
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentplasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8282Putative membrane protein insertion efficiency factor HAMAP-Rule MF_00386
PRO_0000253159

Sequences

Sequence LengthMass (Da)Tools
Q4UM10 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 7F45C1A9B99FD594

FASTA829,499
        10         20         30         40         50         60 
MTRILLLLLR FYQYFISPLL GNNCRFHPTC SEYAKEAITT HGTLKGLWLT FKRIIKCQPF 

        70         80 
CNGGYDAVPL SIKNSKLFNK KI 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61413.1.
RefSeqYP_246578.1. NC_007109.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0562.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61413; AAY61413; RF_0562.
GeneID3400341.
KEGGrfe:RF_0562.
PATRIC17891673. VBIRicFel64634_0669.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0759.
HOGENOMHOG000231600.
KOK08998.
OMAFYPTCSK.
OrthoDBEOG61ZTN6.
ProtClustDBPRK14388.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-576-MONOMER.

Family and domain databases

HAMAPMF_00386. UPF0161_YidD.
InterProIPR002696. Membr_insert_effic_factor.
[Graphical view]
PfamPF01809. Haemolytic. 1 hit.
[Graphical view]
ProDomPD004225. DUF37. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR00278. TIGR00278. 1 hit.
ProtoNetSearch...

Entry information

Entry nameYIDD_RICFE
AccessionPrimary (citable) accession number: Q4UM10
Entry history
Integrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: July 5, 2005
Last modified: February 19, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names