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Protein

Putative polysaccharide polymerase RF_0568

Gene

RF_0568

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-582-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative polysaccharide polymerase RF_0568
Gene namesi
Ordered Locus Names:RF_0568
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
Proteomesi
  • UP000008548 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei15 – 35HelicalSequence analysisAdd BLAST21
Transmembranei71 – 91HelicalSequence analysisAdd BLAST21
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21
Transmembranei129 – 149HelicalSequence analysisAdd BLAST21
Transmembranei166 – 186HelicalSequence analysisAdd BLAST21
Transmembranei203 – 223HelicalSequence analysisAdd BLAST21
Transmembranei229 – 249HelicalSequence analysisAdd BLAST21
Transmembranei272 – 292HelicalSequence analysisAdd BLAST21
Transmembranei324 – 344HelicalSequence analysisAdd BLAST21
Transmembranei379 – 399HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002809911 – 407Putative polysaccharide polymerase RF_0568Add BLAST407

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0568.

Family & Domainsi

Sequence similaritiesi

Belongs to the O-antigen polymerase family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105VFN. Bacteria.
COG3307. LUCA.
HOGENOMiHOG000010752.
OMAiHALMLYI.
OrthoDBiPOG091H0NCD.

Family and domain databases

InterProiIPR007016. O-antigen_ligase-related.
[Graphical view]
PfamiPF04932. Wzy_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4UM04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQYLISSLIF LIPSLGMVAG LSVAATVTIF LLMLFLRGIN RHCERLKGAW
60 70 80 90 100
QSHKAGLLRL LRQNLQFFLA MTIKTELLFT AWCFISCLFA IRPINSLATF
110 120 130 140 150
IQVFILLFLG FTVSNCVPFG NRVQLKNSLI LGILTAILLF FIEYSSHGFL
160 170 180 190 200
TRTFKASFGL YMLDRGCALL SITSWVAIII LLSSGKRRHA LMLYILVLYL
210 220 230 240 250
LSISDSLASF LGFSIGGVIF ILARLIKPIF FKLIAISLIT GSLLFPVIAK
260 270 280 290 300
QIEPRDLSEK YLATQPSAAH RLFIWHFVAN KITLKPILGY GFASSKYIKV
310 320 330 340 350
NNSEMINYNG EKWHPLPLHP HNNILQITLE LGIIGLILFL CLVYKYLKQI
360 370 380 390 400
NNIKSSNFRA ASYSCFINYY IIGMISYNIW QIWWISSGIW VLVLMKLLVK

PDIVVDN
Length:407
Mass (Da):46,181
Last modified:July 5, 2005 - v1
Checksum:i27D1CD8A69ED58A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61419.1.
RefSeqiWP_011270900.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61419; AAY61419; RF_0568.
KEGGirfe:RF_0568.
PATRICi17891687. VBIRicFel64634_0676.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61419.1.
RefSeqiWP_011270900.1. NC_007109.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi315456.RF_0568.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY61419; AAY61419; RF_0568.
KEGGirfe:RF_0568.
PATRICi17891687. VBIRicFel64634_0676.

Phylogenomic databases

eggNOGiENOG4105VFN. Bacteria.
COG3307. LUCA.
HOGENOMiHOG000010752.
OMAiHALMLYI.
OrthoDBiPOG091H0NCD.

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-582-MONOMER.

Family and domain databases

InterProiIPR007016. O-antigen_ligase-related.
[Graphical view]
PfamiPF04932. Wzy_C. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY568_RICFE
AccessioniPrimary (citable) accession number: Q4UM04
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: July 5, 2005
Last modified: September 7, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.