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Q4UM04

- Y568_RICFE

UniProt

Q4UM04 - Y568_RICFE

Protein

Putative polysaccharide polymerase RF_0568

Gene

RF_0568

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (05 Jul 2005)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciRFEL315456:GKEK-582-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative polysaccharide polymerase RF_0568
    Gene namesi
    Ordered Locus Names:RF_0568
    OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
    Taxonomic identifieri315456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000008548: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 407407Putative polysaccharide polymerase RF_0568PRO_0000280991Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi315456.RF_0568.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei15 – 3521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei71 – 9121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei100 – 12021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei129 – 14921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei166 – 18621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei203 – 22321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei229 – 24921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei272 – 29221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei324 – 34421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei379 – 39921HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the O-antigen polymerase family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG3307.
    HOGENOMiHOG000010752.
    OMAiVWQSSNN.
    OrthoDBiEOG679TJ5.

    Sequencei

    Sequence statusi: Complete.

    Q4UM04-1 [UniParc]FASTAAdd to Basket

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    MQYLISSLIF LIPSLGMVAG LSVAATVTIF LLMLFLRGIN RHCERLKGAW    50
    QSHKAGLLRL LRQNLQFFLA MTIKTELLFT AWCFISCLFA IRPINSLATF 100
    IQVFILLFLG FTVSNCVPFG NRVQLKNSLI LGILTAILLF FIEYSSHGFL 150
    TRTFKASFGL YMLDRGCALL SITSWVAIII LLSSGKRRHA LMLYILVLYL 200
    LSISDSLASF LGFSIGGVIF ILARLIKPIF FKLIAISLIT GSLLFPVIAK 250
    QIEPRDLSEK YLATQPSAAH RLFIWHFVAN KITLKPILGY GFASSKYIKV 300
    NNSEMINYNG EKWHPLPLHP HNNILQITLE LGIIGLILFL CLVYKYLKQI 350
    NNIKSSNFRA ASYSCFINYY IIGMISYNIW QIWWISSGIW VLVLMKLLVK 400
    PDIVVDN 407
    Length:407
    Mass (Da):46,181
    Last modified:July 5, 2005 - v1
    Checksum:i27D1CD8A69ED58A8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61419.1.
    RefSeqiWP_011270900.1. NC_007109.1.
    YP_246584.1. NC_007109.1.

    Genome annotation databases

    EnsemblBacteriaiAAY61419; AAY61419; RF_0568.
    GeneIDi3400347.
    KEGGirfe:RF_0568.
    PATRICi17891687. VBIRicFel64634_0676.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61419.1 .
    RefSeqi WP_011270900.1. NC_007109.1.
    YP_246584.1. NC_007109.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 315456.RF_0568.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY61419 ; AAY61419 ; RF_0568 .
    GeneIDi 3400347.
    KEGGi rfe:RF_0568.
    PATRICi 17891687. VBIRicFel64634_0676.

    Phylogenomic databases

    eggNOGi COG3307.
    HOGENOMi HOG000010752.
    OMAi VWQSSNN.
    OrthoDBi EOG679TJ5.

    Enzyme and pathway databases

    BioCyci RFEL315456:GKEK-582-MONOMER.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
      Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
      PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-1525 / URRWXCal2.

    Entry informationi

    Entry nameiY568_RICFE
    AccessioniPrimary (citable) accession number: Q4UM04
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 20, 2007
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia felis (Rickettsia azadi)
      Rickettsia felis (strain URRWXCal2): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3