Q4UM04 (Y568_RICFE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative polysaccharide polymerase RF_0568

Gene names

Ordered Locus Names:

RF_0568

Organism

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]

Taxonomic identifier

315456 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia felis

Protein attributes

Sequence length	407 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the O-antigen polymerase family.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 407	407	Putative polysaccharide polymerase RF_0568		PRO_0000280991
Regions
	Transmembrane	15 – 35	21	Helical; Potential
	Transmembrane	71 – 91	21	Helical; Potential
	Transmembrane	100 – 120	21	Helical; Potential
	Transmembrane	129 – 149	21	Helical; Potential
	Transmembrane	166 – 186	21	Helical; Potential
	Transmembrane	203 – 223	21	Helical; Potential
	Transmembrane	229 – 249	21	Helical; Potential
	Transmembrane	272 – 292	21	Helical; Potential
	Transmembrane	324 – 344	21	Helical; Potential
	Transmembrane	379 – 399	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	Q4UM04 [UniParc]. Last modified July 5, 2005. Version 1. Checksum: 27D1CD8A69ED58A8	FASTA	407	46,181
	10 20 30 40 50 60 MQYLISSLIF LIPSLGMVAG LSVAATVTIF LLMLFLRGIN RHCERLKGAW QSHKAGLLRL 70 80 90 100 110 120 LRQNLQFFLA MTIKTELLFT AWCFISCLFA IRPINSLATF IQVFILLFLG FTVSNCVPFG 130 140 150 160 170 180 NRVQLKNSLI LGILTAILLF FIEYSSHGFL TRTFKASFGL YMLDRGCALL SITSWVAIII 190 200 210 220 230 240 LLSSGKRRHA LMLYILVLYL LSISDSLASF LGFSIGGVIF ILARLIKPIF FKLIAISLIT 250 260 270 280 290 300 GSLLFPVIAK QIEPRDLSEK YLATQPSAAH RLFIWHFVAN KITLKPILGY GFASSKYIKV 310 320 330 340 350 360 NNSEMINYNG EKWHPLPLHP HNNILQITLE LGIIGLILFL CLVYKYLKQI NNIKSSNFRA 370 380 390 400 ASYSCFINYY IIGMISYNIW QIWWISSGIW VLVLMKLLVK PDIVVDN

References

[1]

"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite." Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D. PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000053 Genomic DNA. Translation: AAY61419.1.
RefSeq	YP_246584.1. NC_007109.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	315456.RF_0568.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAY61419; AAY61419; RF_0568.
GeneID	3400347.
KEGG	rfe:RF_0568.
PATRIC	17891687. VBIRicFel64634_0676.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3307.
HOGENOM	HOG000010752.
OMA	IEYSSHG.
ProtClustDB	CLSK870880.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

Y568_RICFE

Accession

Primary (citable) accession number: Q4UM04

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 20, 2007
Last sequence update:	July 5, 2005
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program