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Q4UM04 (Y568_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative polysaccharide polymerase RF_0568
Gene names
Ordered Locus Names:RF_0568
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the O-antigen polymerase family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 407407Putative polysaccharide polymerase RF_0568
PRO_0000280991

Regions

Transmembrane15 – 3521Helical; Potential
Transmembrane71 – 9121Helical; Potential
Transmembrane100 – 12021Helical; Potential
Transmembrane129 – 14921Helical; Potential
Transmembrane166 – 18621Helical; Potential
Transmembrane203 – 22321Helical; Potential
Transmembrane229 – 24921Helical; Potential
Transmembrane272 – 29221Helical; Potential
Transmembrane324 – 34421Helical; Potential
Transmembrane379 – 39921Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q4UM04 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 27D1CD8A69ED58A8

FASTA40746,181
        10         20         30         40         50         60 
MQYLISSLIF LIPSLGMVAG LSVAATVTIF LLMLFLRGIN RHCERLKGAW QSHKAGLLRL 

        70         80         90        100        110        120 
LRQNLQFFLA MTIKTELLFT AWCFISCLFA IRPINSLATF IQVFILLFLG FTVSNCVPFG 

       130        140        150        160        170        180 
NRVQLKNSLI LGILTAILLF FIEYSSHGFL TRTFKASFGL YMLDRGCALL SITSWVAIII 

       190        200        210        220        230        240 
LLSSGKRRHA LMLYILVLYL LSISDSLASF LGFSIGGVIF ILARLIKPIF FKLIAISLIT 

       250        260        270        280        290        300 
GSLLFPVIAK QIEPRDLSEK YLATQPSAAH RLFIWHFVAN KITLKPILGY GFASSKYIKV 

       310        320        330        340        350        360 
NNSEMINYNG EKWHPLPLHP HNNILQITLE LGIIGLILFL CLVYKYLKQI NNIKSSNFRA 

       370        380        390        400 
ASYSCFINYY IIGMISYNIW QIWWISSGIW VLVLMKLLVK PDIVVDN 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61419.1.
RefSeqYP_246584.1. NC_007109.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0568.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61419; AAY61419; RF_0568.
GeneID3400347.
KEGGrfe:RF_0568.
PATRIC17891687. VBIRicFel64634_0676.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3307.
HOGENOMHOG000010752.
OMAVWQSSNN.
OrthoDBEOG679TJ5.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-582-MONOMER.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameY568_RICFE
AccessionPrimary (citable) accession number: Q4UM04
Entry history
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: July 5, 2005
Last modified: May 14, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names