Q4ULQ0 (RECR_RICFE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Recombination protein RecR

Gene names

Name:	recR
Ordered Locus Names:	RF_0672

Organism

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]

Taxonomic identifier

315456 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia felis

Protein attributes

Sequence length	201 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO By similarity. HAMAP-Rule MF_00017
Sequence similarities	Belongs to the RecR family. Contains 1 Toprim domain.
Sequence caution	The sequence AAY61523.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	DNA damage DNA recombination DNA repair
Domain	Zinc-finger
Ligand	Metal-binding Zinc
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: HAMAP DNA repair Inferred from electronic annotation. Source: HAMAP
Molecular_function	DNA binding Inferred from electronic annotation. Source: HAMAP metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 201	201	Recombination protein RecR HAMAP-Rule MF_00017		PRO_0000190375
Regions
	Domain	82 – 177	96	Toprim
	Zinc finger	59 – 74	16	C4-type Potential

Sequences

	Sequence		Length	Mass (Da)
	Q4ULQ0 [UniParc]. Last modified August 16, 2005. Version 2. Checksum: ACC819732F8E5C68	FASTA	201	22,610
	10 20 30 40 50 60 MNKTNDNDID QLIYLFSKLP GLGSRSARRI VLYLLQDKDV RLKSLINNLV EIDKKIVKCE 70 80 90 100 110 120 ICGNMDTENI CCICSSEYRD KSVIAVVETV AELWAMERSS NFKGLYHVLG HNLSAASRQN 130 140 150 160 170 180 PSILRLPELL KRCFAENIKE VIIATNSTLE GQTTAYFITE YLREHPAKIS RLASGIPIGG 190 200 ELDYLDEGTL SAAINLRQPF E

References

[1]

"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite." Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D. PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000053 Genomic DNA. Translation: AAY61523.1. Different initiation.
RefSeq	YP_246688.1. NC_007109.1.
3D structure databases
ProteinModelPortal	Q4ULQ0.
ModBase	Search...
Protein-protein interaction databases
STRING	315456.RF_0672.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAY61523; AAY61523; RF_0672.
GeneID	3401297.
KEGG	rfe:RF_0672.
PATRIC	17891956. VBIRicFel64634_0807.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0353.
HOGENOM	HOG000103272.
KO	K06187.
ProtClustDB	PRK00076.
Family and domain databases
HAMAP	MF_00017. RecR.
InterPro	IPR000093. DNA_Rcmb_RecR. IPR023627. Rcmb_RecR. IPR023628. Rcmb_RecR_C4-type_Zn. IPR015967. Rcmb_RecR_CS. IPR006171. Toprim_domain. [Graphical view]
Pfam	PF02132. RecR. 1 hit. PF13662. Toprim_4. 1 hit. [Graphical view]
SMART	SM00493. TOPRIM. 1 hit. [Graphical view]
SUPFAM	SSF111304. RecR. 1 hit.
TIGRFAMs	TIGR00615. recR. 1 hit.
PROSITE	PS01300. RECR. 1 hit. PS50880. TOPRIM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RECR_RICFE

Accession

Primary (citable) accession number: Q4ULQ0

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 16, 2005
Last sequence update:	August 16, 2005
Last modified:	May 1, 2013
This is version 47 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program