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Q4ULQ0

- RECR_RICFE

UniProt

Q4ULQ0 - RECR_RICFE

Protein

Recombination protein RecR

Gene

recR

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 2 (16 Aug 2005)
      Previous versions | rss
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    Functioni

    May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri59 – 7416C4-typeUniRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-HAMAP
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. DNA recombination Source: UniProtKB-HAMAP
    2. DNA repair Source: UniProtKB-HAMAP

    Keywords - Biological processi

    DNA damage, DNA recombination, DNA repair

    Keywords - Ligandi

    Metal-binding, Zinc

    Enzyme and pathway databases

    BioCyciRFEL315456:GKEK-689-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Recombination protein RecRUniRule annotation
    Gene namesi
    Name:recRUniRule annotation
    Ordered Locus Names:RF_0672
    OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
    Taxonomic identifieri315456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000008548: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 201201Recombination protein RecRPRO_0000190375Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi315456.RF_0672.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4ULQ0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini82 – 17796ToprimUniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the RecR family.UniRule annotation
    Contains 1 Toprim domain.UniRule annotation

    Zinc finger

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri59 – 7416C4-typeUniRule annotationAdd
    BLAST

    Keywords - Domaini

    Zinc-finger

    Phylogenomic databases

    eggNOGiCOG0353.
    HOGENOMiHOG000103272.
    KOiK06187.
    OrthoDBiEOG62NX85.

    Family and domain databases

    HAMAPiMF_00017. RecR.
    InterProiIPR000093. DNA_Rcmb_RecR.
    IPR023627. Rcmb_RecR.
    IPR023628. Rcmb_RecR_C4-type_Zn.
    IPR015967. Rcmb_RecR_CS.
    IPR006171. Toprim_domain.
    [Graphical view]
    PfamiPF02132. RecR. 1 hit.
    PF13662. Toprim_4. 1 hit.
    [Graphical view]
    SMARTiSM00493. TOPRIM. 1 hit.
    [Graphical view]
    SUPFAMiSSF111304. SSF111304. 1 hit.
    TIGRFAMsiTIGR00615. recR. 1 hit.
    PROSITEiPS01300. RECR. 1 hit.
    PS50880. TOPRIM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4ULQ0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNKTNDNDID QLIYLFSKLP GLGSRSARRI VLYLLQDKDV RLKSLINNLV    50
    EIDKKIVKCE ICGNMDTENI CCICSSEYRD KSVIAVVETV AELWAMERSS 100
    NFKGLYHVLG HNLSAASRQN PSILRLPELL KRCFAENIKE VIIATNSTLE 150
    GQTTAYFITE YLREHPAKIS RLASGIPIGG ELDYLDEGTL SAAINLRQPF 200
    E 201
    Length:201
    Mass (Da):22,610
    Last modified:August 16, 2005 - v2
    Checksum:iACC819732F8E5C68
    GO

    Sequence cautioni

    The sequence AAY61523.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61523.1. Different initiation.
    RefSeqiYP_246688.1. NC_007109.1.

    Genome annotation databases

    EnsemblBacteriaiAAY61523; AAY61523; RF_0672.
    GeneIDi3401297.
    KEGGirfe:RF_0672.
    PATRICi17891956. VBIRicFel64634_0807.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61523.1 . Different initiation.
    RefSeqi YP_246688.1. NC_007109.1.

    3D structure databases

    ProteinModelPortali Q4ULQ0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 315456.RF_0672.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY61523 ; AAY61523 ; RF_0672 .
    GeneIDi 3401297.
    KEGGi rfe:RF_0672.
    PATRICi 17891956. VBIRicFel64634_0807.

    Phylogenomic databases

    eggNOGi COG0353.
    HOGENOMi HOG000103272.
    KOi K06187.
    OrthoDBi EOG62NX85.

    Enzyme and pathway databases

    BioCyci RFEL315456:GKEK-689-MONOMER.

    Family and domain databases

    HAMAPi MF_00017. RecR.
    InterProi IPR000093. DNA_Rcmb_RecR.
    IPR023627. Rcmb_RecR.
    IPR023628. Rcmb_RecR_C4-type_Zn.
    IPR015967. Rcmb_RecR_CS.
    IPR006171. Toprim_domain.
    [Graphical view ]
    Pfami PF02132. RecR. 1 hit.
    PF13662. Toprim_4. 1 hit.
    [Graphical view ]
    SMARTi SM00493. TOPRIM. 1 hit.
    [Graphical view ]
    SUPFAMi SSF111304. SSF111304. 1 hit.
    TIGRFAMsi TIGR00615. recR. 1 hit.
    PROSITEi PS01300. RECR. 1 hit.
    PS50880. TOPRIM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
      Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
      PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-1525 / URRWXCal2.

    Entry informationi

    Entry nameiRECR_RICFE
    AccessioniPrimary (citable) accession number: Q4ULQ0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 16, 2005
    Last sequence update: August 16, 2005
    Last modified: October 1, 2014
    This is version 53 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia felis (Rickettsia azadi)
      Rickettsia felis (strain URRWXCal2): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3