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Q4ULQ0

- RECR_RICFE

UniProt

Q4ULQ0 - RECR_RICFE

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Protein
Recombination protein RecR
Gene
recR, RF_0672
Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri59 – 7416C4-type Reviewed prediction
Add
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-HAMAP
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. DNA recombination Source: UniProtKB-HAMAP
  2. DNA repair Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

DNA damage, DNA recombination, DNA repair

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-689-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Recombination protein RecR
Gene namesi
Name:recR
Ordered Locus Names:RF_0672
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 201201Recombination protein RecRUniRule annotation
PRO_0000190375Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0672.

Structurei

3D structure databases

ProteinModelPortaliQ4ULQ0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini82 – 17796Toprim
Add
BLAST

Sequence similaritiesi

Belongs to the RecR family.
Contains 1 Toprim domain.

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiCOG0353.
HOGENOMiHOG000103272.
KOiK06187.
OrthoDBiEOG62NX85.

Family and domain databases

HAMAPiMF_00017. RecR.
InterProiIPR000093. DNA_Rcmb_RecR.
IPR023627. Rcmb_RecR.
IPR023628. Rcmb_RecR_C4-type_Zn.
IPR015967. Rcmb_RecR_CS.
IPR006171. Toprim_domain.
[Graphical view]
PfamiPF02132. RecR. 1 hit.
PF13662. Toprim_4. 1 hit.
[Graphical view]
SMARTiSM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF111304. SSF111304. 1 hit.
TIGRFAMsiTIGR00615. recR. 1 hit.
PROSITEiPS01300. RECR. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4ULQ0-1 [UniParc]FASTAAdd to Basket

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MNKTNDNDID QLIYLFSKLP GLGSRSARRI VLYLLQDKDV RLKSLINNLV    50
EIDKKIVKCE ICGNMDTENI CCICSSEYRD KSVIAVVETV AELWAMERSS 100
NFKGLYHVLG HNLSAASRQN PSILRLPELL KRCFAENIKE VIIATNSTLE 150
GQTTAYFITE YLREHPAKIS RLASGIPIGG ELDYLDEGTL SAAINLRQPF 200
E 201
Length:201
Mass (Da):22,610
Last modified:August 16, 2005 - v2
Checksum:iACC819732F8E5C68
GO

Sequence cautioni

The sequence AAY61523.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY61523.1. Different initiation.
RefSeqiYP_246688.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61523; AAY61523; RF_0672.
GeneIDi3401297.
KEGGirfe:RF_0672.
PATRICi17891956. VBIRicFel64634_0807.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY61523.1 . Different initiation.
RefSeqi YP_246688.1. NC_007109.1.

3D structure databases

ProteinModelPortali Q4ULQ0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 315456.RF_0672.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY61523 ; AAY61523 ; RF_0672 .
GeneIDi 3401297.
KEGGi rfe:RF_0672.
PATRICi 17891956. VBIRicFel64634_0807.

Phylogenomic databases

eggNOGi COG0353.
HOGENOMi HOG000103272.
KOi K06187.
OrthoDBi EOG62NX85.

Enzyme and pathway databases

BioCyci RFEL315456:GKEK-689-MONOMER.

Family and domain databases

HAMAPi MF_00017. RecR.
InterProi IPR000093. DNA_Rcmb_RecR.
IPR023627. Rcmb_RecR.
IPR023628. Rcmb_RecR_C4-type_Zn.
IPR015967. Rcmb_RecR_CS.
IPR006171. Toprim_domain.
[Graphical view ]
Pfami PF02132. RecR. 1 hit.
PF13662. Toprim_4. 1 hit.
[Graphical view ]
SMARTi SM00493. TOPRIM. 1 hit.
[Graphical view ]
SUPFAMi SSF111304. SSF111304. 1 hit.
TIGRFAMsi TIGR00615. recR. 1 hit.
PROSITEi PS01300. RECR. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry nameiRECR_RICFE
AccessioniPrimary (citable) accession number: Q4ULQ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: August 16, 2005
Last modified: May 14, 2014
This is version 52 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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