Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q4ULQ0 (RECR_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Recombination protein RecR
Gene names
Name:recR
Ordered Locus Names:RF_0672
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO By similarity. HAMAP-Rule MF_00017

Sequence similarities

Belongs to the RecR family.

Contains 1 Toprim domain.

Sequence caution

The sequence AAY61523.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processDNA damage
DNA recombination
DNA repair
   DomainZinc-finger
   LigandMetal-binding
Zinc
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: UniProtKB-HAMAP

DNA repair

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 201201Recombination protein RecR HAMAP-Rule MF_00017
PRO_0000190375

Regions

Domain82 – 17796Toprim
Zinc finger59 – 7416C4-type Potential

Sequences

Sequence LengthMass (Da)Tools
Q4ULQ0 [UniParc].

Last modified August 16, 2005. Version 2.
Checksum: ACC819732F8E5C68

FASTA20122,610
        10         20         30         40         50         60 
MNKTNDNDID QLIYLFSKLP GLGSRSARRI VLYLLQDKDV RLKSLINNLV EIDKKIVKCE 

        70         80         90        100        110        120 
ICGNMDTENI CCICSSEYRD KSVIAVVETV AELWAMERSS NFKGLYHVLG HNLSAASRQN 

       130        140        150        160        170        180 
PSILRLPELL KRCFAENIKE VIIATNSTLE GQTTAYFITE YLREHPAKIS RLASGIPIGG 

       190        200 
ELDYLDEGTL SAAINLRQPF E 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61523.1. Different initiation.
RefSeqYP_246688.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4ULQ0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0672.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61523; AAY61523; RF_0672.
GeneID3401297.
KEGGrfe:RF_0672.
PATRIC17891956. VBIRicFel64634_0807.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0353.
HOGENOMHOG000103272.
KOK06187.
OrthoDBEOG62NX85.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-689-MONOMER.

Family and domain databases

HAMAPMF_00017. RecR.
InterProIPR000093. DNA_Rcmb_RecR.
IPR023627. Rcmb_RecR.
IPR023628. Rcmb_RecR_C4-type_Zn.
IPR015967. Rcmb_RecR_CS.
IPR006171. Toprim_domain.
[Graphical view]
PfamPF02132. RecR. 1 hit.
PF13662. Toprim_4. 1 hit.
[Graphical view]
SMARTSM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMSSF111304. SSF111304. 1 hit.
TIGRFAMsTIGR00615. recR. 1 hit.
PROSITEPS01300. RECR. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRECR_RICFE
AccessionPrimary (citable) accession number: Q4ULQ0
Entry history
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: August 16, 2005
Last modified: May 14, 2014
This is version 52 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names