Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q4ULI1 (SODF_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Mn/Fe]
EC=1.15.1.1
Gene names
Name:sodB
Ordered Locus Names:RF_0741
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group ›

Protein attributes

Sequence length209 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Cofactor

Binds 1 manganese or iron ion per subunit By similarity.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Sequence caution

The sequence AAY61592.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandIron
Manganese
Metal-binding
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

superoxide dismutase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 209209Superoxide dismutase [Mn/Fe]
PRO_0000286502

Sites

Metal binding381Manganese or iron By similarity
Metal binding901Manganese or iron By similarity
Metal binding1721Manganese or iron By similarity
Metal binding1761Manganese or iron By similarity

Sequences

Sequence LengthMass (Da)Tools
Q4ULI1 [UniParc].

Last modified May 15, 2007. Version 2.
Checksum: AACCBBD4D89F325C

FASTA20924,465
        10         20         30         40         50         60 
MTYCNKSNQT SYPFILPDLP YDKESFKPHF TPETFDYHHG KHHNAYVQNL NNLLKDKEEL 

        70         80         90        100        110        120 
QKKDLEEIIE WSSQNSNAAI FNNAAQIWNH SFFWHSIKPQ GGGKPSGKIL EQINKDFGSF 

       130        140        150        160        170        180 
EGFCEQFKQE AVGQFGSGWA WLVYHDNRLQ IIKTANAGTP IANGMKPLLA CDVWEHAYYI 

       190        200 
DYRNKRPDYV DIFIKHMINW KFVEDNLIK

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000053 Genomic DNA. Translation: AAY61592.1. Different initiation.
RefSeqYP_246757.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4ULI1.
SMRQ4ULI1. Positions 14-207.
ModBaseSearch...

Protein-protein interaction databases

STRING315456.RF_0741.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61592; AAY61592; RF_0741.
GeneID3400808.
KEGGrfe:RF_0741.
PATRIC17892134. VBIRicFel64634_0895.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013584.
KOK04564.
OMANCMAPNG.
ProtClustDBCLSK870979.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-760-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SODismutase. 1 hit.
SSF54719. SODismutase. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSODF_RICFE
AccessionPrimary (citable) accession number: Q4ULI1
Entry history
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: May 15, 2007
Last modified: May 29, 2013
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents