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Q4UL54 (RECO_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA repair protein RecO
Alternative name(s):
Recombination protein O
Gene names
Name:recO
Ordered Locus Names:RF_0868
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in DNA repair and RecF pathway recombination By similarity. HAMAP-Rule MF_00201

Sequence similarities

Belongs to the RecO family.

Ontologies

Keywords
   Biological processDNA damage
DNA recombination
DNA repair
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: UniProtKB-HAMAP

DNA repair

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 237237DNA repair protein RecO HAMAP-Rule MF_00201
PRO_1000193421

Sequences

Sequence LengthMass (Da)Tools
Q4UL54 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: AF269317F6157B2C

FASTA23727,668
        10         20         30         40         50         60 
MNIKDVGVII AKKPLKENTF IITVFTKNHG LYSGVVKESS KKSKFIYQEG NIVDFLWQAR 

        70         80         90        100        110        120 
LHEHIGMAKC ELIKSYTGYF IINKAKLYAF NSVISLIKEL FHEREEHSNF FSFLINYLDN 

       130        140        150        160        170        180 
LSKNFCFRDY INFELALLAE TGYKLDLTKC GVTHVTTDLN YVSPKSARAL SYEVGKPYKD 

       190        200        210        220        230 
KLLILPKFLL SDDSEITLEE KRQASTLTNY FFNRYLFHNN RQAEARQIFM EYILNNS 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61719.1.
RefSeqYP_246884.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UL54.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0868.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61719; AAY61719; RF_0868.
GeneID3400744.
KEGGrfe:RF_0868.
PATRIC17892441. VBIRicFel64634_1042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1381.
HOGENOMHOG000144060.
KOK03584.
OMARHVYEPR.
OrthoDBEOG68Q0NP.
ProtClustDBPRK00085.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-893-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
HAMAPMF_00201. RecO.
InterProIPR022572. DNA_rep/recomb_RecO_N.
IPR012340. NA-bd_OB-fold.
IPR003717. RecO.
[Graphical view]
PfamPF02565. RecO_C. 1 hit.
PF11967. RecO_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00613. reco. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRECO_RICFE
AccessionPrimary (citable) accession number: Q4UL54
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: July 5, 2005
Last modified: February 19, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names