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Protein

UPF0092 membrane protein RF_0958

Gene

RF_0958

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-987-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0092 membrane protein RF_0958
Gene namesi
Ordered Locus Names:RF_0958
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei33 – 5321HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 142142UPF0092 membrane protein RF_0958PRO_0000282379Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0958.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OrthoDBiEOG6WQDDS.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UKW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSANTQDNQA NNNDTIEIQE TEVVPVETNS LQSGLTSLTP MVLIFAVFYF
60 70 80 90 100
LLLRPQEKRR KEREKLVSEV KKGEEVLTNS GIYGIVTKVS ENDNNIEIEI
110 120 130 140
AKDVRIKALK SAIVDITSRT KEVAVKKENN KKDKKVSGAK SS
Length:142
Mass (Da):15,866
Last modified:April 3, 2007 - v2
Checksum:iAD1A1A5256FD3D1C
GO

Sequence cautioni

The sequence AAY61809.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61809.1. Different initiation.
RefSeqiYP_246974.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61809; AAY61809; RF_0958.
KEGGirfe:RF_0958.
PATRICi17892663. VBIRicFel64634_1149.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61809.1. Different initiation.
RefSeqiYP_246974.1. NC_007109.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi315456.RF_0958.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY61809; AAY61809; RF_0958.
KEGGirfe:RF_0958.
PATRICi17892663. VBIRicFel64634_1149.

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OrthoDBiEOG6WQDDS.

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-987-MONOMER.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry nameiY958_RICFE
AccessioniPrimary (citable) accession number: Q4UKW4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: April 3, 2007
Last modified: April 1, 2015
This is version 57 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.