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Q4UKW4 (Y958_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0092 membrane protein RF_0958
Gene names
Ordered Locus Names:RF_0958
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length142 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Single-pass membrane protein Potential.

Sequence similarities

Belongs to the UPF0092 family.

Sequence caution

The sequence AAY61809.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 142142UPF0092 membrane protein RF_0958
PRO_0000282379

Regions

Transmembrane33 – 5321Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q4UKW4 [UniParc].

Last modified April 3, 2007. Version 2.
Checksum: AD1A1A5256FD3D1C

FASTA14215,866
        10         20         30         40         50         60 
MSANTQDNQA NNNDTIEIQE TEVVPVETNS LQSGLTSLTP MVLIFAVFYF LLLRPQEKRR 

        70         80         90        100        110        120 
KEREKLVSEV KKGEEVLTNS GIYGIVTKVS ENDNNIEIEI AKDVRIKALK SAIVDITSRT 

       130        140 
KEVAVKKENN KKDKKVSGAK SS 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61809.1. Different initiation.
RefSeqYP_246974.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UKW4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0958.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61809; AAY61809; RF_0958.
GeneID3400966.
KEGGrfe:RF_0958.
PATRIC17892663. VBIRicFel64634_1149.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1862.
HOGENOMHOG000018859.
KOK03210.
OMATSLIPMI.
OrthoDBEOG6WQDDS.
ProtClustDBPRK05585.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-987-MONOMER.

Family and domain databases

InterProIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamPF02699. YajC. 1 hit.
[Graphical view]
PRINTSPR01853. YAJCTRNLCASE.
TIGRFAMsTIGR00739. yajC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY958_RICFE
AccessionPrimary (citable) accession number: Q4UKW4
Entry history
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: April 3, 2007
Last modified: February 19, 2014
This is version 52 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names