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Q4UKJ1 (RECN_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA repair protein RecN
Alternative name(s):
Recombination protein N
Gene names
Name:recN
Ordered Locus Names:RF_1089
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in recombinational repair of damaged DNA By similarity.

Sequence similarities

Belongs to the RecN family.

Ontologies

Keywords
   Biological processDNA damage
DNA repair
   LigandATP-binding
Nucleotide-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 546546DNA repair protein RecN
PRO_0000286656

Regions

Nucleotide binding29 – 368ATP Potential

Sequences

Sequence LengthMass (Da)Tools
Q4UKJ1 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: A2205193BDCB76DD

FASTA54661,798
        10         20         30         40         50         60 
MFHSLLVKNF ILIDELEIEF NKGLCVITGE TGAGKSILLD AILFCLGYKT SNNIIKRGKD 

        70         80         90        100        110        120 
YAVVNIIFSL NEEIKNFLIQ NFIEPEELLL VKCLQKAEGR KNFFINNQVV NKAIMQQLAT 

       130        140        150        160        170        180 
YLFELHGQNN NISLLEANTQ RDILDSYGNL LDFRAELSKC YQTWQNTRKE IAEITLKQNS 

       190        200        210        220        230        240 
IDQEIDYLSF ATEELTKLNI QIGEEEKLAN IRKDLQNKDK DLQLIKDVLE QINNPEINTS 

       250        260        270        280        290        300 
INRAEKLLAR QGDNERFEAI ATSLEEAYNN LEEARQGLSN LLDSFNYEEY NLEETEERLF 

       310        320        330        340        350        360 
LIKAISRKYN VPADELGIFL DKSLEQLGIL KNKIANSNEL KAQEMLLQKK YYELASDLSV 

       370        380        390        400        410        420 
KRLIAAKHLE ESLHQELKQL KMAKAIFEIE IIAGKEPTAS GNDDIVFKAS TNPGMATEAI 

       430        440        450        460        470        480 
NKIASGGELS RFMLALKTSL FDKMVKPSII FDEIDVGIGG EVADKVGERL KKLSSVTQVI 

       490        500        510        520        530        540 
VITHQPQVAG KADLHIKIEK TQLEKETKVT VKALNLAERQ EELARMISGK TITEASLKAA 


KELLHL 

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References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61940.1.
RefSeqYP_247105.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UKJ1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_1089.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61940; AAY61940; RF_1089.
GeneID3400199.
KEGGrfe:RF_1089.
PATRIC17892990. VBIRicFel64634_1310.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0497.
HOGENOMHOG000009326.
KOK03631.
OMAQVICVTH.
OrthoDBEOG6WQD34.
ProtClustDBCLSK870782.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-1121-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 3 hits.
InterProIPR004604. DNA_recomb/repair_RecN.
IPR027417. P-loop_NTPase.
IPR003395. RecF/RecN/SMC_N.
[Graphical view]
PANTHERPTHR11059. PTHR11059. 1 hit.
PfamPF02463. SMC_N. 1 hit.
[Graphical view]
PIRSFPIRSF003128. RecN. 1 hit.
SUPFAMSSF52540. SSF52540. 3 hits.
TIGRFAMsTIGR00634. recN. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRECN_RICFE
AccessionPrimary (citable) accession number: Q4UKJ1
Entry history
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: July 5, 2005
Last modified: April 16, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names