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Protein

Ribosome-recycling factor

Gene

frr

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-1160-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome-recycling factorUniRule annotation
Short name:
RRFUniRule annotation
Alternative name(s):
Ribosome-releasing factorUniRule annotation
Gene namesi
Name:frrUniRule annotation
Ordered Locus Names:RF_1127
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 186186Ribosome-recycling factorPRO_0000167528Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_1127.

Structurei

3D structure databases

ProteinModelPortaliQ4UKF3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RRF family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0233.
HOGENOMiHOG000040143.
KOiK02838.
OMAiTPLNQVG.
OrthoDBiEOG6SV5F9.

Family and domain databases

HAMAPiMF_00040. RRF.
InterProiIPR002661. Ribosome_recyc_fac.
IPR023584. Ribosome_recyc_fac_dom.
[Graphical view]
PANTHERiPTHR20982. PTHR20982. 1 hit.
PfamiPF01765. RRF. 1 hit.
[Graphical view]
SUPFAMiSSF55194. SSF55194. 1 hit.
TIGRFAMsiTIGR00496. frr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UKF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTETLKKNL QEKMDKALKV LDHELKGLRT GRASVNLLDS VTVEAYGSKM
60 70 80 90 100
PLSQVASLST PDARTINVQV WDKSMVSSVE KGITIANLGL TPATDGQLIR
110 120 130 140 150
LPIPALTEER RKELVKLAHK YGEDTKISLR NIRRDGNEEL KKLEKDNIIA
160 170 180
KDEHHSLSEQ VQKLTDDYSS KVDSAIKQKE QEIMTV
Length:186
Mass (Da):20,864
Last modified:July 5, 2005 - v1
Checksum:i761574C075F3137D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61978.1.
RefSeqiWP_011271437.1. NC_007109.1.
YP_247143.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61978; AAY61978; RF_1127.
KEGGirfe:RF_1127.
PATRICi17893094. VBIRicFel64634_1361.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY61978.1.
RefSeqiWP_011271437.1. NC_007109.1.
YP_247143.1. NC_007109.1.

3D structure databases

ProteinModelPortaliQ4UKF3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi315456.RF_1127.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY61978; AAY61978; RF_1127.
KEGGirfe:RF_1127.
PATRICi17893094. VBIRicFel64634_1361.

Phylogenomic databases

eggNOGiCOG0233.
HOGENOMiHOG000040143.
KOiK02838.
OMAiTPLNQVG.
OrthoDBiEOG6SV5F9.

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-1160-MONOMER.

Family and domain databases

HAMAPiMF_00040. RRF.
InterProiIPR002661. Ribosome_recyc_fac.
IPR023584. Ribosome_recyc_fac_dom.
[Graphical view]
PANTHERiPTHR20982. PTHR20982. 1 hit.
PfamiPF01765. RRF. 1 hit.
[Graphical view]
SUPFAMiSSF55194. SSF55194. 1 hit.
TIGRFAMsiTIGR00496. frr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry nameiRRF_RICFE
AccessioniPrimary (citable) accession number: Q4UKF3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: July 5, 2005
Last modified: May 27, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.