Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q4UKF3 (RRF_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribosome-recycling factor

Short name=RRF
Alternative name(s):
Ribosome-releasing factor
Gene names
Name:frr
Ordered Locus Names:RF_1127
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length186 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another By similarity. HAMAP-Rule MF_00040

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00040.

Sequence similarities

Belongs to the RRF family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslational termination

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 186186Ribosome-recycling factor HAMAP-Rule MF_00040
PRO_0000167528

Sequences

Sequence LengthMass (Da)Tools
Q4UKF3 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 761574C075F3137D

FASTA18620,864
        10         20         30         40         50         60 
MDTETLKKNL QEKMDKALKV LDHELKGLRT GRASVNLLDS VTVEAYGSKM PLSQVASLST 

        70         80         90        100        110        120 
PDARTINVQV WDKSMVSSVE KGITIANLGL TPATDGQLIR LPIPALTEER RKELVKLAHK 

       130        140        150        160        170        180 
YGEDTKISLR NIRRDGNEEL KKLEKDNIIA KDEHHSLSEQ VQKLTDDYSS KVDSAIKQKE 


QEIMTV 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61978.1.
RefSeqYP_247143.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UKF3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_1127.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61978; AAY61978; RF_1127.
GeneID3401424.
KEGGrfe:RF_1127.
PATRIC17893094. VBIRicFel64634_1361.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0233.
HOGENOMHOG000040143.
KOK02838.
OMAPNNDGKV.
OrthoDBEOG6SV5F9.
ProtClustDBPRK00083.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-1160-MONOMER.

Family and domain databases

HAMAPMF_00040. RRF.
InterProIPR002661. Ribosome_recyc_fac.
IPR023584. Ribosome_recyc_fac_dom.
[Graphical view]
PANTHERPTHR20982. PTHR20982. 1 hit.
PfamPF01765. RRF. 1 hit.
[Graphical view]
SUPFAMSSF55194. SSF55194. 1 hit.
TIGRFAMsTIGR00496. frr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRRF_RICFE
AccessionPrimary (citable) accession number: Q4UKF3
Entry history
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: July 5, 2005
Last modified: February 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names