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Q4UKD3

- RL7_RICFE

UniProt

Q4UKD3 - RL7_RICFE

Protein

50S ribosomal protein L7/L12

Gene

rplL

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciRFEL315456:GKEK-1180-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L7/L12UniRule annotation
    Gene namesi
    Name:rplLUniRule annotation
    Ordered Locus Names:RF_1147
    OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
    Taxonomic identifieri315456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000008548: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12512550S ribosomal protein L7/L12PRO_0000243486Add
    BLAST

    Interactioni

    Subunit structurei

    Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.UniRule annotation

    Protein-protein interaction databases

    STRINGi315456.RF_1147.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4UKD3.
    SMRiQ4UKD3. Positions 6-125.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L7/L12P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0222.
    HOGENOMiHOG000248813.
    KOiK02935.
    OMAiEFISNMT.

    Family and domain databases

    Gene3Di3.30.1390.10. 1 hit.
    HAMAPiMF_00368. Ribosomal_L7_L12.
    InterProiIPR000206. Ribosomal_L7/12.
    IPR014719. Ribosomal_L7/12_C/ClpS-like.
    IPR013823. Ribosomal_L7/L12_C.
    IPR008932. Ribosomal_L7/L12_oligo.
    [Graphical view]
    PANTHERiPTHR11809. PTHR11809. 1 hit.
    PfamiPF00542. Ribosomal_L12. 1 hit.
    [Graphical view]
    ProDomiPD001326. Ribosomal_L7/L12_C. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF48300. SSF48300. 1 hit.
    SSF54736. SSF54736. 1 hit.
    TIGRFAMsiTIGR00855. L12. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4UKD3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADLAKIEEQ LSSLTLMQAA ELVKMLEEKW GVSAAAPVAV AAAGAAAPAA    50
    EAAAEKTEFE IVLMAAGDKK VEVIKVVKDI TGLGLIEAKK LVDEAPKPMK 100
    SNVKKAEAEE IKGKLEAAGA KVELK 125
    Length:125
    Mass (Da):12,996
    Last modified:July 5, 2005 - v1
    Checksum:i7C6A4005DC667873
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61998.1.
    RefSeqiWP_011271456.1. NC_007109.1.
    YP_247163.1. NC_007109.1.

    Genome annotation databases

    EnsemblBacteriaiAAY61998; AAY61998; RF_1147.
    GeneIDi3401444.
    KEGGirfe:RF_1147.
    PATRICi17893138. VBIRicFel64634_1383.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY61998.1 .
    RefSeqi WP_011271456.1. NC_007109.1.
    YP_247163.1. NC_007109.1.

    3D structure databases

    ProteinModelPortali Q4UKD3.
    SMRi Q4UKD3. Positions 6-125.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 315456.RF_1147.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY61998 ; AAY61998 ; RF_1147 .
    GeneIDi 3401444.
    KEGGi rfe:RF_1147.
    PATRICi 17893138. VBIRicFel64634_1383.

    Phylogenomic databases

    eggNOGi COG0222.
    HOGENOMi HOG000248813.
    KOi K02935.
    OMAi EFISNMT.

    Enzyme and pathway databases

    BioCyci RFEL315456:GKEK-1180-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1390.10. 1 hit.
    HAMAPi MF_00368. Ribosomal_L7_L12.
    InterProi IPR000206. Ribosomal_L7/12.
    IPR014719. Ribosomal_L7/12_C/ClpS-like.
    IPR013823. Ribosomal_L7/L12_C.
    IPR008932. Ribosomal_L7/L12_oligo.
    [Graphical view ]
    PANTHERi PTHR11809. PTHR11809. 1 hit.
    Pfami PF00542. Ribosomal_L12. 1 hit.
    [Graphical view ]
    ProDomi PD001326. Ribosomal_L7/L12_C. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF48300. SSF48300. 1 hit.
    SSF54736. SSF54736. 1 hit.
    TIGRFAMsi TIGR00855. L12. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
      Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
      PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-1525 / URRWXCal2.

    Entry informationi

    Entry nameiRL7_RICFE
    AccessioniPrimary (citable) accession number: Q4UKD3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia felis (Rickettsia azadi)
      Rickettsia felis (strain URRWXCal2): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3