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Q4UKD3 (RL7_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L7/L12
Gene names
Name:rplL
Ordered Locus Names:RF_1147
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length125 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation By similarity. HAMAP-Rule MF_00368

Subunit structure

Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors By similarity.

Sequence similarities

Belongs to the ribosomal protein L7/L12P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12512550S ribosomal protein L7/L12 HAMAP-Rule MF_00368
PRO_0000243486

Sequences

Sequence LengthMass (Da)Tools
Q4UKD3 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 7C6A4005DC667873

FASTA12512,996
        10         20         30         40         50         60 
MADLAKIEEQ LSSLTLMQAA ELVKMLEEKW GVSAAAPVAV AAAGAAAPAA EAAAEKTEFE 

        70         80         90        100        110        120 
IVLMAAGDKK VEVIKVVKDI TGLGLIEAKK LVDEAPKPMK SNVKKAEAEE IKGKLEAAGA 


KVELK 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY61998.1.
RefSeqYP_247163.1. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UKD3.
SMRQ4UKD3. Positions 6-125.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_1147.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY61998; AAY61998; RF_1147.
GeneID3401444.
KEGGrfe:RF_1147.
PATRIC17893138. VBIRicFel64634_1383.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0222.
HOGENOMHOG000248813.
KOK02935.
OMAEFISNMT.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-1180-MONOMER.

Family and domain databases

Gene3D3.30.1390.10. 1 hit.
HAMAPMF_00368. Ribosomal_L7_L12.
InterProIPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
IPR008932. Ribosomal_L7/L12_oligo.
[Graphical view]
PANTHERPTHR11809. PTHR11809. 1 hit.
PfamPF00542. Ribosomal_L12. 1 hit.
[Graphical view]
ProDomPD001326. Ribosomal_L7/L12_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF48300. SSF48300. 1 hit.
SSF54736. SSF54736. 1 hit.
TIGRFAMsTIGR00855. L12. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL7_RICFE
AccessionPrimary (citable) accession number: Q4UKD3
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2005
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries