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Q4UKD3

- RL7_RICFE

UniProt

Q4UKD3 - RL7_RICFE

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Protein

50S ribosomal protein L7/L12

Gene

rplL

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.UniRule annotation

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-1180-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L7/L12UniRule annotation
Gene namesi
Name:rplLUniRule annotation
Ordered Locus Names:RF_1147
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12512550S ribosomal protein L7/L12PRO_0000243486Add
BLAST

Interactioni

Subunit structurei

Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.UniRule annotation

Protein-protein interaction databases

STRINGi315456.RF_1147.

Structurei

3D structure databases

ProteinModelPortaliQ4UKD3.
SMRiQ4UKD3. Positions 6-125.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L7/L12P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0222.
HOGENOMiHOG000248813.
KOiK02935.
OMAiEFISNMT.

Family and domain databases

Gene3Di3.30.1390.10. 1 hit.
HAMAPiMF_00368. Ribosomal_L7_L12.
InterProiIPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
IPR008932. Ribosomal_L7/L12_oligo.
[Graphical view]
PANTHERiPTHR11809. PTHR11809. 1 hit.
PfamiPF00542. Ribosomal_L12. 1 hit.
[Graphical view]
ProDomiPD001326. Ribosomal_L7/L12_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF48300. SSF48300. 1 hit.
SSF54736. SSF54736. 1 hit.
TIGRFAMsiTIGR00855. L12. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UKD3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MADLAKIEEQ LSSLTLMQAA ELVKMLEEKW GVSAAAPVAV AAAGAAAPAA
60 70 80 90 100
EAAAEKTEFE IVLMAAGDKK VEVIKVVKDI TGLGLIEAKK LVDEAPKPMK
110 120
SNVKKAEAEE IKGKLEAAGA KVELK
Length:125
Mass (Da):12,996
Last modified:July 5, 2005 - v1
Checksum:i7C6A4005DC667873
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY61998.1.
RefSeqiYP_247163.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY61998; AAY61998; RF_1147.
GeneIDi3401444.
KEGGirfe:RF_1147.
PATRICi17893138. VBIRicFel64634_1383.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY61998.1 .
RefSeqi YP_247163.1. NC_007109.1.

3D structure databases

ProteinModelPortali Q4UKD3.
SMRi Q4UKD3. Positions 6-125.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 315456.RF_1147.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY61998 ; AAY61998 ; RF_1147 .
GeneIDi 3401444.
KEGGi rfe:RF_1147.
PATRICi 17893138. VBIRicFel64634_1383.

Phylogenomic databases

eggNOGi COG0222.
HOGENOMi HOG000248813.
KOi K02935.
OMAi EFISNMT.

Enzyme and pathway databases

BioCyci RFEL315456:GKEK-1180-MONOMER.

Family and domain databases

Gene3Di 3.30.1390.10. 1 hit.
HAMAPi MF_00368. Ribosomal_L7_L12.
InterProi IPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
IPR008932. Ribosomal_L7/L12_oligo.
[Graphical view ]
PANTHERi PTHR11809. PTHR11809. 1 hit.
Pfami PF00542. Ribosomal_L12. 1 hit.
[Graphical view ]
ProDomi PD001326. Ribosomal_L7/L12_C. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF48300. SSF48300. 1 hit.
SSF54736. SSF54736. 1 hit.
TIGRFAMsi TIGR00855. L12. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry nameiRL7_RICFE
AccessioniPrimary (citable) accession number: Q4UKD3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2005
Last modified: October 29, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3