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Protein

UPF0235 protein RF_1332

Gene

RF_1332

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-1369-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0235 protein RF_1332UniRule annotation
Gene namesi
Ordered Locus Names:RF_1332
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 105105UPF0235 protein RF_1332PRO_0000277941Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_1332.

Structurei

3D structure databases

ProteinModelPortaliQ4UJV6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0235 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1872.
HOGENOMiHOG000019209.
KOiK09131.
OrthoDBiEOG6JX7MZ.

Family and domain databases

Gene3Di3.30.1200.10. 1 hit.
HAMAPiMF_00634. UPF0235.
InterProiIPR003746. DUF167.
[Graphical view]
PfamiPF02594. DUF167. 1 hit.
[Graphical view]
SUPFAMiSSF69786. SSF69786. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UJV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKFYNYNSS SHQVLLNLKV KPNSKQNLIS DFVIINNIPY LKLSIKATPE
60 70 80 90 100
QGKANEEIIN YLAKEWKLSR KDIEIIKGHT NSLKTILIKN IDEDYLNLII

NSYIK
Length:105
Mass (Da):12,222
Last modified:February 20, 2007 - v2
Checksum:i3EAA5FECAD3A3295
GO

Sequence cautioni

The sequence AAY62183.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY62183.1. Different initiation.
RefSeqiYP_247348.2. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY62183; AAY62183; RF_1332.
GeneIDi3400888.
KEGGirfe:RF_1332.
PATRICi17893588. VBIRicFel64634_1604.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY62183.1. Different initiation.
RefSeqiYP_247348.2. NC_007109.1.

3D structure databases

ProteinModelPortaliQ4UJV6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi315456.RF_1332.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY62183; AAY62183; RF_1332.
GeneIDi3400888.
KEGGirfe:RF_1332.
PATRICi17893588. VBIRicFel64634_1604.

Phylogenomic databases

eggNOGiCOG1872.
HOGENOMiHOG000019209.
KOiK09131.
OrthoDBiEOG6JX7MZ.

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-1369-MONOMER.

Family and domain databases

Gene3Di3.30.1200.10. 1 hit.
HAMAPiMF_00634. UPF0235.
InterProiIPR003746. DUF167.
[Graphical view]
PfamiPF02594. DUF167. 1 hit.
[Graphical view]
SUPFAMiSSF69786. SSF69786. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry nameiY1332_RICFE
AccessioniPrimary (citable) accession number: Q4UJV6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 20, 2007
Last sequence update: February 20, 2007
Last modified: January 7, 2015
This is version 47 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.