Q4STM3 (Q4STM3_TETNG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chromosome undetermined SCAF14146, whole genome shotgun sequence. EMBL CAF96009.1

Gene names

ORF Names:

GSTENG00012875001 EMBL CAF96009.1

Organism

Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)

Taxonomic identifier

99883 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Euteleostei › Neoteleostei › Acanthomorpha › Acanthopterygii › Percomorpha › Tetraodontiformes › Tetradontoidea › Tetraodontidae › Tetraodon

Protein attributes

Sequence length	360 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	360	1	EMBL CAF96009.1

Sequences

	Sequence		Length	Mass (Da)
	Q4STM3 [UniParc]. Last modified July 19, 2005. Version 1. Checksum: AE1AD9823A69CC5F	FASTA	360	39,370
	10 20 30 40 50 60 MAMSLVNIIR KGKPVVSALR RRNFHKTVPA AVQVTVRDAL NQAMDEELER DERVFLLGEE 70 80 90 100 110 120 VAQYDGAYKV SRGLWKKYGD KRVIDTPISE MGFAGIAVGA AMAGLRPICE FMTFNFSMQA 130 140 150 160 170 180 IDQVINSAAK TYYMSAGLQP VPIVFRGPNG ASAGVAAQHS QCFAAWYAHC PGLKVVSPWN 190 200 210 220 230 240 AEDCKGLLKA AIRDDNPVVF LENELMYGVP FDMSEESQSK DFVIPIGKAK VERAGNHVTL 250 260 270 280 290 300 VSHSRYVGHC LDAAAVLAKE GIECEVINLR TIRPMDVGCI EASVMKTNHL LTVEGGWPQF 310 320 330 340 350 360 GVGAEICAQI MEGPAFNYLD APVSRVTGVD IPMPYAKILE DNSVPQVKDI IFSVKKMLNV

References

[1]

"Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype." Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C., Salanoubat M. , Levy M., Boudet N., Castellano S., Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P., Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C., McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R., Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H. Nature 431:946-957(2004) [PubMed: 15496914] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAE01014146 Genomic DNA. Translation: CAF96009.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q4STM3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
NMPDR	fig|99883.3.peg.882.
Phylogenomic databases
eggNOG	fiNOG09133.
HOVERGEN	HBG000917.
OMA	MEHAFDY.
OrthoDB	EOG4CJVHD.
PhylomeDB	Q4STM3.
Family and domain databases
InterPro	IPR009014. Transketo_C/Pyr-ferredox_oxred. IPR015941. Transketolase-like_C. IPR005475. Transketolase-like_Pyr-bd. IPR005476. Transketolase_C. [Graphical view]
Gene3D	G3DSA:3.40.50.920. Transketo_C_like. 1 hit.
Pfam	PF02779. Transket_pyr. 1 hit. PF02780. Transketolase_C. 1 hit. [Graphical view]
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAM	SSF52922. Transketo_C_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q4STM3_TETNG

Accession

Primary (citable) accession number: Q4STM3

Entry history

Integrated into UniProtKB/TrEMBL:	July 19, 2005
Last sequence update:	July 19, 2005
Last modified:	October 19, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)