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Q4RYW4

- Q4RYW4_TETNG

UniProt

Q4RYW4 - Q4RYW4_TETNG

Protein
Submitted name:

Chromosome 16 SCAF14974, whole genome shotgun sequence

Gene

FOXL2

Organism
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 1 (19 Jul 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: InterPro
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationSAAS annotation

    Keywords - Ligandi

    DNA-bindingSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Chromosome 16 SCAF14974, whole genome shotgun sequenceImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:FOXL2Imported
    ORF Names:GSTENG00026767001Imported
    OrganismiTetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
    Taxonomic identifieri99883 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataPercomorphariaTetraodontiformesTetradontoideaTetraodontidaeTetraodon
    ProteomesiUP000007303: Unplaced

    Subcellular locationi

    Nucleus SAAS annotation

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    NucleusSAAS annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi99883.ENSTNIP00000017337.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4RYW4.
    SMRiQ4RYW4. Positions 47-136.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains fork-head DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG5025.
    GeneTreeiENSGT00740000114928.
    HOVERGENiHBG051651.
    OMAiELSMMHC.
    OrthoDBiEOG7C8GHD.
    TreeFamiTF316127.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR001766. TF_fork_head.
    IPR018122. TF_fork_head_CS.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00250. Fork_head. 1 hit.
    [Graphical view]
    PRINTSiPR00053. FORKHEAD.
    SMARTiSM00339. FH. 1 hit.
    [Graphical view]
    PROSITEiPS00657. FORK_HEAD_1. 1 hit.
    PS00658. FORK_HEAD_2. 1 hit.
    PS50039. FORK_HEAD_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4RYW4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMATYQNPED DAMALMIHDT NTTKEKERPK EEPVQDKVEE KPDPSQKPPY    50
    SYVALIAMAI RESSEKRLTL SGIYQYIISK FPFYEKNKKG WQNSIRHNLS 100
    LNECFIKVPR EGGGERKGNY WTLDPACEDM FEKGNYRRRR RMKRPFRPPP 150
    THFQPGKSLF GGDGYGYLSP PKYLQSSFMN NSWSLGQPPP PMSYTSCQMA 200
    SGNVSPVNVK GLSAPTSYNP YSRVQSMALP SMVNSYNGMS HHHHPAHPHH 250
    AQQLSPATAA PPPVSSSNGA GLQFACSRQP SEFSMMHCSY WEHETKHSPL 300
    HTRIDI 306
    Length:306
    Mass (Da):34,710
    Last modified:July 19, 2005 - v1
    Checksum:i97E74681EB660154
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAAE01014974 Genomic DNA. Translation: CAG06418.1.

    Genome annotation databases

    EnsembliENSTNIT00000017555; ENSTNIP00000017337; ENSTNIG00000014321.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAAE01014974 Genomic DNA. Translation: CAG06418.1 .

    3D structure databases

    ProteinModelPortali Q4RYW4.
    SMRi Q4RYW4. Positions 47-136.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 99883.ENSTNIP00000017337.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSTNIT00000017555 ; ENSTNIP00000017337 ; ENSTNIG00000014321 .

    Phylogenomic databases

    eggNOGi COG5025.
    GeneTreei ENSGT00740000114928.
    HOVERGENi HBG051651.
    OMAi ELSMMHC.
    OrthoDBi EOG7C8GHD.
    TreeFami TF316127.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR001766. TF_fork_head.
    IPR018122. TF_fork_head_CS.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00250. Fork_head. 1 hit.
    [Graphical view ]
    PRINTSi PR00053. FORKHEAD.
    SMARTi SM00339. FH. 1 hit.
    [Graphical view ]
    PROSITEi PS00657. FORK_HEAD_1. 1 hit.
    PS00658. FORK_HEAD_2. 1 hit.
    PS50039. FORK_HEAD_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype."
      Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C., Salanoubat M.
      , Levy M., Boudet N., Castellano S., Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P., Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C., McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R., Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.
      Nature 431:946-957(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Genoscope, Whitehead Institute Centre for Genome Research
      Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    3. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiQ4RYW4_TETNG
    AccessioniPrimary (citable) accession number: Q4RYW4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 19, 2005
    Last sequence update: July 19, 2005
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3