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Protein
Submitted name:

Chromosome 16 SCAF14974, whole genome shotgun sequence

Gene

FOXL2

Organism
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome 16 SCAF14974, whole genome shotgun sequenceImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:FOXL2Imported
ORF Names:GSTENG00026767001Imported
OrganismiTetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Taxonomic identifieri99883 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTetraodon
ProteomesiUP000007303 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi99883.ENSTNIP00000017337.

Structurei

3D structure databases

ProteinModelPortaliQ4RYW4.
SMRiQ4RYW4. Positions 47-136.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains fork-head DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG5025.
GeneTreeiENSGT00760000118904.
HOVERGENiHBG051651.
InParanoidiQ4RYW4.
OMAiELSMMHC.
OrthoDBiEOG7C8GHD.
TreeFamiTF316127.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS_1.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Fork_head. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
PROSITEiPS00657. FORK_HEAD_1. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4RYW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMATYQNPED DAMALMIHDT NTTKEKERPK EEPVQDKVEE KPDPSQKPPY
60 70 80 90 100
SYVALIAMAI RESSEKRLTL SGIYQYIISK FPFYEKNKKG WQNSIRHNLS
110 120 130 140 150
LNECFIKVPR EGGGERKGNY WTLDPACEDM FEKGNYRRRR RMKRPFRPPP
160 170 180 190 200
THFQPGKSLF GGDGYGYLSP PKYLQSSFMN NSWSLGQPPP PMSYTSCQMA
210 220 230 240 250
SGNVSPVNVK GLSAPTSYNP YSRVQSMALP SMVNSYNGMS HHHHPAHPHH
260 270 280 290 300
AQQLSPATAA PPPVSSSNGA GLQFACSRQP SEFSMMHCSY WEHETKHSPL

HTRIDI
Length:306
Mass (Da):34,710
Last modified:July 19, 2005 - v1
Checksum:i97E74681EB660154
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAE01014974 Genomic DNA. Translation: CAG06418.1.

Genome annotation databases

EnsembliENSTNIT00000017555; ENSTNIP00000017337; ENSTNIG00000014321.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAE01014974 Genomic DNA. Translation: CAG06418.1.

3D structure databases

ProteinModelPortaliQ4RYW4.
SMRiQ4RYW4. Positions 47-136.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99883.ENSTNIP00000017337.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSTNIT00000017555; ENSTNIP00000017337; ENSTNIG00000014321.

Phylogenomic databases

eggNOGiCOG5025.
GeneTreeiENSGT00760000118904.
HOVERGENiHBG051651.
InParanoidiQ4RYW4.
OMAiELSMMHC.
OrthoDBiEOG7C8GHD.
TreeFamiTF316127.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS_1.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Fork_head. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
PROSITEiPS00657. FORK_HEAD_1. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype."
    Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C., Salanoubat M.
    , Levy M., Boudet N., Castellano S., Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P., Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C., McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R., Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.
    Nature 431:946-957(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Genoscope, Whitehead Institute Centre for Genome Research
    Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ4RYW4_TETNG
AccessioniPrimary (citable) accession number: Q4RYW4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: May 27, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.