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Q4RYW4

- Q4RYW4_TETNG

UniProt

Q4RYW4 - Q4RYW4_TETNG

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Protein
Submitted name:

Chromosome 16 SCAF14974, whole genome shotgun sequence

Gene

FOXL2

Organism
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome 16 SCAF14974, whole genome shotgun sequenceImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:FOXL2Imported
ORF Names:GSTENG00026767001Imported
OrganismiTetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Taxonomic identifieri99883 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTetraodon
ProteomesiUP000007303: Unplaced

Subcellular locationi

Nucleus SAAS annotation

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi99883.ENSTNIP00000017337.

Structurei

3D structure databases

ProteinModelPortaliQ4RYW4.
SMRiQ4RYW4. Positions 47-136.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains fork-head DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG5025.
GeneTreeiENSGT00760000118904.
HOVERGENiHBG051651.
InParanoidiQ4RYW4.
OMAiELSMMHC.
OrthoDBiEOG7C8GHD.
TreeFamiTF316127.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Fork_head. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
PROSITEiPS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4RYW4 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMATYQNPED DAMALMIHDT NTTKEKERPK EEPVQDKVEE KPDPSQKPPY
60 70 80 90 100
SYVALIAMAI RESSEKRLTL SGIYQYIISK FPFYEKNKKG WQNSIRHNLS
110 120 130 140 150
LNECFIKVPR EGGGERKGNY WTLDPACEDM FEKGNYRRRR RMKRPFRPPP
160 170 180 190 200
THFQPGKSLF GGDGYGYLSP PKYLQSSFMN NSWSLGQPPP PMSYTSCQMA
210 220 230 240 250
SGNVSPVNVK GLSAPTSYNP YSRVQSMALP SMVNSYNGMS HHHHPAHPHH
260 270 280 290 300
AQQLSPATAA PPPVSSSNGA GLQFACSRQP SEFSMMHCSY WEHETKHSPL

HTRIDI
Length:306
Mass (Da):34,710
Last modified:July 19, 2005 - v1
Checksum:i97E74681EB660154
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAAE01014974 Genomic DNA. Translation: CAG06418.1.

Genome annotation databases

EnsembliENSTNIT00000017555; ENSTNIP00000017337; ENSTNIG00000014321.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAAE01014974 Genomic DNA. Translation: CAG06418.1 .

3D structure databases

ProteinModelPortali Q4RYW4.
SMRi Q4RYW4. Positions 47-136.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 99883.ENSTNIP00000017337.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSTNIT00000017555 ; ENSTNIP00000017337 ; ENSTNIG00000014321 .

Phylogenomic databases

eggNOGi COG5025.
GeneTreei ENSGT00760000118904.
HOVERGENi HBG051651.
InParanoidi Q4RYW4.
OMAi ELSMMHC.
OrthoDBi EOG7C8GHD.
TreeFami TF316127.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00250. Fork_head. 1 hit.
[Graphical view ]
PRINTSi PR00053. FORKHEAD.
SMARTi SM00339. FH. 1 hit.
[Graphical view ]
PROSITEi PS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype."
    Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C., Salanoubat M.
    , Levy M., Boudet N., Castellano S., Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P., Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C., McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R., Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.
    Nature 431:946-957(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Genoscope, Whitehead Institute Centre for Genome Research
    Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ4RYW4_TETNG
AccessioniPrimary (citable) accession number: Q4RYW4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: October 29, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3