Q4RFP0 (Q4RFP0_TETNG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chromosome 16 SCAF15113, whole genome shotgun sequence EMBL CAG12792.1

Gene names

ORF Names:

GSTENG00035235001 EMBL CAG12792.1

Organism

Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)

Taxonomic identifier

99883 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Euteleostei › Neoteleostei › Acanthomorpha › Acanthopterygii › Percomorpha › Tetraodontiformes › Tetradontoidea › Tetraodontidae › Tetraodon

Protein attributes

Sequence length	474 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	asparaginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW asparagine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q4RFP0 [UniParc]. Last modified July 19, 2005. Version 1. Checksum: 01AEF020D24E7A13	FASTA	474	53,736
	10 20 30 40 50 60 MLSFAFLRSR SIFCIRHYCK KTPTKLRISE ALSGSKFGAN IKVQGWVRSV RSQKKNLFLH 70 80 90 100 110 120 VNDGSSLQSL QIIASSDLNN PLLTFGCAVE VTGFLKPSPH QKQPVELEAD RIRVVGECDP 130 140 150 160 170 180 VDFPFKIKER HGVDYIRQFP HLRCRTNVFG SLLRVRSEAT AAIHSYFQEN GYTQIHTPVI 190 200 210 220 230 240 TSNDCEGAGE LFQVEPQISE GDANENFFSV PAFLTVSGQL HLEIMSGAFS EVYTFGPTFR 250 260 270 280 290 300 AENSQSRRHL AEFYMVEAEL SFTQSIEDLT EVVEDVFRSA TERVLTQCAE DVALFHKHVS 310 320 330 340 350 360 PGHRDSVDDW LRKKFPIITY SEAVNILNRS TQNFVFPTKW GCDLQKEHEK YLVKHCGNIP 370 380 390 400 410 420 VFVTDYPYEL KPFYARDNQD HPEHTAAAVD LLVPGVGELC GGSLREERLD LLKARLEVAG 430 440 450 460 470 LEDVYSWYLD LRRFGSIPHG GFGLGFERYL QCVLGVDNIK DVIPFPRFSH SCLL

References

[1]

"Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype." Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C., Salanoubat M. , Levy M., Boudet N., Castellano S., Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P., Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C., McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R., Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H. Nature 431:946-957(2004) [PubMed: 15496914] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAE01015113 Genomic DNA. Translation: CAG12792.1.
3D structure databases
ProteinModelPortal	Q4RFP0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q4RFP0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSTNIT00000022471; ENSTNIP00000022232; ENSTNIG00000019041.
NMPDR	fig|99883.3.peg.25828.
Phylogenomic databases
eggNOG	fiNOG04107.
HOVERGEN	HBG067799.
OMA	HYELHAD.
OrthoDB	EOG4DJJWB.
PhylomeDB	Q4RFP0.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004522. Asn-tRNA-synth_IIb. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF6. PTHR22594:SF6. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00457. AsnS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q4RFP0_TETNG

Accession

Primary (citable) accession number: Q4RFP0

Entry history

Integrated into UniProtKB/TrEMBL:	July 19, 2005
Last sequence update:	July 19, 2005
Last modified:	October 19, 2011
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)