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Protein

28S ribosomal protein S25, mitochondrial

Gene

Mrps25

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840 Mitochondrial translation elongation
R-RNO-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S25, mitochondrial
Short name:
MRP-S25
Short name:
S25mt
Gene namesi
Name:Mrps25
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1308770 Mrps25

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002399201 – 17128S ribosomal protein S25, mitochondrialAdd BLAST171

Proteomic databases

PaxDbiQ4QR80
PRIDEiQ4QR80

Expressioni

Gene expression databases

BgeeiENSRNOG00000010912
GenevisibleiQ4QR80 RN

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014933

Structurei

3D structure databases

ProteinModelPortaliQ4QR80
SMRiQ4QR80
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG4079 Eukaryota
ENOG410YI66 LUCA
GeneTreeiENSGT00640000091558
HOGENOMiHOG000007270
HOVERGENiHBG002378
InParanoidiQ4QR80
KOiK17404
OMAiKIMTVNY
OrthoDBiEOG091G0P9B
PhylomeDBiQ4QR80
TreeFamiTF300292

Family and domain databases

InterProiView protein in InterPro
IPR007741 Ribosome/NADH_DH
IPR036249 Thioredoxin-like_sf
PfamiView protein in Pfam
PF05047 L51_S25_CI-B8, 1 hit
SMARTiView protein in SMART
SM00916 L51_S25_CI-B8, 1 hit
SUPFAMiSSF52833 SSF52833, 1 hit

Sequencei

Sequence statusi: Complete.

Q4QR80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPMKGRFPIR RTLQYLGSGD VVFKESVKVM TVNYNTHGEL GEGARKFVFF
60 70 80 90 100
NIPQIQYKNP WVQIMLFKNM TPSPFLRFYL ESGEQVLVDV ETKSNTEIVE
110 120 130 140 150
HIKKILGKKE ETLREEELEK QQRFHPGNFG PRKYCLRECM CEVEGQVPCP
160 170
GLVPLPKEMT GKYKAALKAN T
Length:171
Mass (Da):19,775
Last modified:July 19, 2005 - v1
Checksum:iB704960DF4167DCB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC097381 mRNA Translation: AAH97381.1
RefSeqiNP_001020579.1, NM_001025408.1
UniGeneiRn.3814

Genome annotation databases

EnsembliENSRNOT00000014933; ENSRNOP00000014933; ENSRNOG00000010912
GeneIDi297459
KEGGirno:297459
UCSCiRGD:1308770 rat

Similar proteinsi

Entry informationi

Entry nameiRT25_RAT
AccessioniPrimary (citable) accession number: Q4QR80
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: July 19, 2005
Last modified: May 23, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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