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Protein

28S ribosomal protein S25, mitochondrial

Gene

Mrps25

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S25, mitochondrial
Short name:
MRP-S25
Short name:
S25mt
Gene namesi
Name:Mrps25
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1308770. Mrps25.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 17117128S ribosomal protein S25, mitochondrialPRO_0000239920Add
BLAST

Proteomic databases

PaxDbiQ4QR80.
PRIDEiQ4QR80.

Expressioni

Gene expression databases

BgeeiENSRNOG00000010912.
GenevisibleiQ4QR80. RN.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014933.

Structurei

3D structure databases

ProteinModelPortaliQ4QR80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S25/L51 family.Curated

Phylogenomic databases

eggNOGiKOG4079. Eukaryota.
ENOG410YI66. LUCA.
GeneTreeiENSGT00640000091558.
HOGENOMiHOG000007270.
HOVERGENiHBG002378.
InParanoidiQ4QR80.
KOiK17404.
OMAiMTGKYRA.
OrthoDBiEOG091G0P9B.
PhylomeDBiQ4QR80.
TreeFamiTF300292.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR007741. Ribosome/NADH_DH.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF05047. L51_S25_CI-B8. 1 hit.
[Graphical view]
SMARTiSM00916. L51_S25_CI-B8. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4QR80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPMKGRFPIR RTLQYLGSGD VVFKESVKVM TVNYNTHGEL GEGARKFVFF
60 70 80 90 100
NIPQIQYKNP WVQIMLFKNM TPSPFLRFYL ESGEQVLVDV ETKSNTEIVE
110 120 130 140 150
HIKKILGKKE ETLREEELEK QQRFHPGNFG PRKYCLRECM CEVEGQVPCP
160 170
GLVPLPKEMT GKYKAALKAN T
Length:171
Mass (Da):19,775
Last modified:July 19, 2005 - v1
Checksum:iB704960DF4167DCB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC097381 mRNA. Translation: AAH97381.1.
RefSeqiNP_001020579.1. NM_001025408.1.
UniGeneiRn.3814.

Genome annotation databases

EnsembliENSRNOT00000014933; ENSRNOP00000014933; ENSRNOG00000010912.
GeneIDi297459.
KEGGirno:297459.
UCSCiRGD:1308770. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC097381 mRNA. Translation: AAH97381.1.
RefSeqiNP_001020579.1. NM_001025408.1.
UniGeneiRn.3814.

3D structure databases

ProteinModelPortaliQ4QR80.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014933.

Proteomic databases

PaxDbiQ4QR80.
PRIDEiQ4QR80.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000014933; ENSRNOP00000014933; ENSRNOG00000010912.
GeneIDi297459.
KEGGirno:297459.
UCSCiRGD:1308770. rat.

Organism-specific databases

CTDi64432.
RGDi1308770. Mrps25.

Phylogenomic databases

eggNOGiKOG4079. Eukaryota.
ENOG410YI66. LUCA.
GeneTreeiENSGT00640000091558.
HOGENOMiHOG000007270.
HOVERGENiHBG002378.
InParanoidiQ4QR80.
KOiK17404.
OMAiMTGKYRA.
OrthoDBiEOG091G0P9B.
PhylomeDBiQ4QR80.
TreeFamiTF300292.

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiQ4QR80.

Gene expression databases

BgeeiENSRNOG00000010912.
GenevisibleiQ4QR80. RN.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR007741. Ribosome/NADH_DH.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF05047. L51_S25_CI-B8. 1 hit.
[Graphical view]
SMARTiSM00916. L51_S25_CI-B8. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRT25_RAT
AccessioniPrimary (citable) accession number: Q4QR80
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: July 19, 2005
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.