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Q4QQR7

- Q4QQR7_RAT

UniProt

Q4QQR7 - Q4QQR7_RAT

Protein
Submitted name:

Dsp protein

Gene

Dsp

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (19 Jul 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural molecule activity Source: Ensembl

    GO - Biological processi

    1. adherens junction organization Source: Ensembl
    2. bundle of His cell to Purkinje myocyte communication Source: Ensembl
    3. desmosome organization Source: Ensembl
    4. intermediate filament organization Source: Ensembl
    5. keratinocyte differentiation Source: Ensembl
    6. peptide cross-linking Source: Ensembl
    7. protein localization to adherens junction Source: Ensembl
    8. regulation of heart rate by cardiac conduction Source: Ensembl
    9. single organismal cell-cell adhesion Source: Ensembl
    10. ventricular cardiac muscle cell action potential Source: Ensembl
    11. ventricular compact myocardium morphogenesis Source: Ensembl
    12. wound healing Source: RGD

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Dsp proteinImported
    Gene namesi
    Name:DspImported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi1305794. Dsp.

    Subcellular locationi

    GO - Cellular componenti

    1. basolateral plasma membrane Source: Ensembl
    2. cornified envelope Source: Ensembl
    3. desmosome Source: RGD
    4. fascia adherens Source: RGD
    5. intermediate filament Source: Ensembl
    6. membrane Source: MGI
    7. mitochondrion Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PaxDbiQ4QQR7.
    PRIDEiQ4QQR7.

    PTM databases

    PhosphoSiteiQ4QQR7.

    Expressioni

    Gene expression databases

    GenevestigatoriQ4QQR7.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000018649.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG12793.
    HOGENOMiHOG000112198.
    HOVERGENiHBG068419.
    InParanoidiQ4QQR7.
    PhylomeDBiQ4QQR7.

    Family and domain databases

    Gene3Di3.90.1290.10. 4 hits.
    InterProiIPR028462. Desmoplakin.
    IPR001101. Plectin_repeat.
    [Graphical view]
    PANTHERiPTHR11915:SF234. PTHR11915:SF234. 1 hit.
    PfamiPF00681. Plectin. 6 hits.
    [Graphical view]
    SMARTiSM00250. PLEC. 12 hits.
    [Graphical view]
    SUPFAMiSSF75399. SSF75399. 4 hits.

    Sequencei

    Sequence statusi: Fragment.

    Q4QQR7-1 [UniParc]FASTAAdd to Basket

    « Hide

    LESGQISYDE VGERIKDFLQ GSSCIAGIYN ETTKQKLGIY EAMKIGLVRP    50
    GTALELLEAQ AATGFIVDPV SNLRLPVEEA YKRGLVGIEF KEKLLSAERA 100
    VTGYNDPETG NIISLFQAMN KELIEKGHGI RLLEAQIATG GIIDPKESHR 150
    LPVDMAYKRG YFNEELSEIL SDPSDDTKGF FDPNTEENLT YLQLKERCIK 200
    DEETGLCLLP LKEKKKQVQT SQKNTLRKRR VVIVDPETNK EMSVQEAYKK 250
    GLIDYETFKE LCEQECEWEE ITITGSDGST RVVLVDRKTG SQYDIQDAID 300
    KGLVDRKFFD QYRSGSLSLT QFADMISLKN GVGTSSGLSG SVNDDVFSSS 350
    RHESVSKIST ISSVRNLTIR SSSLSDPLEE SSPIAAIFDT ENLEKISITE 400
    GIERGIVDSI TGQRLLEAQA CTGGIIHPTT GQKLSLQDAV SQGLIDQDMA 450
    TRLKPAQKAF IGFEGVKGKK KMSAAEAVKE KWLPYEAGQR FLEFQFLTGG 500
    LVDPEVHGRI STEEAIRKGF IDGRAAQRLQ DISSYAKILT CPKTKLKISY 550
    KDAMNRSMVE DITGLRLLEA ASVSSKGLPS PYNMSAPGSR SGSRSGSRSG 600
    SRSGSRSGSR RGSFDATGNS SYSYSYSFSS SSIGY 635
    Length:635
    Mass (Da):69,750
    Last modified:July 19, 2005 - v1
    Checksum:iFB027E6B587CB1B4
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC098071 mRNA. Translation: AAH98071.1.
    UniGeneiRn.231913.

    Genome annotation databases

    UCSCiRGD:1305794. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC098071 mRNA. Translation: AAH98071.1 .
    UniGenei Rn.231913.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000018649.

    PTM databases

    PhosphoSitei Q4QQR7.

    Proteomic databases

    PaxDbi Q4QQR7.
    PRIDEi Q4QQR7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    UCSCi RGD:1305794. rat.

    Organism-specific databases

    RGDi 1305794. Dsp.

    Phylogenomic databases

    eggNOGi NOG12793.
    HOGENOMi HOG000112198.
    HOVERGENi HBG068419.
    InParanoidi Q4QQR7.
    PhylomeDBi Q4QQR7.

    Gene expression databases

    Genevestigatori Q4QQR7.

    Family and domain databases

    Gene3Di 3.90.1290.10. 4 hits.
    InterProi IPR028462. Desmoplakin.
    IPR001101. Plectin_repeat.
    [Graphical view ]
    PANTHERi PTHR11915:SF234. PTHR11915:SF234. 1 hit.
    Pfami PF00681. Plectin. 6 hits.
    [Graphical view ]
    SMARTi SM00250. PLEC. 12 hits.
    [Graphical view ]
    SUPFAMi SSF75399. SSF75399. 4 hits.
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: PlacentaImported.

    Entry informationi

    Entry nameiQ4QQR7_RAT
    AccessioniPrimary (citable) accession number: Q4QQR7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 19, 2005
    Last sequence update: July 19, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)