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Protein
Submitted name:

Ribonuclease mar1

Gene

MAR1

Organism
Leishmania major
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribonuclease mar1Imported
Gene namesi
Name:MAR1Imported
ORF Names:LMJF_12_0060Imported
OrganismiLeishmania majorImported
Taxonomic identifieri5664 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
ProteomesiUP000000542 Componenti: Chromosome 12

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XN4X-ray3.80A1-192[»]
ProteinModelPortaliQ4QGT7.
SMRiQ4QGT7. Positions 2-192.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ4QGT7.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000231573.
InParanoidiQ4QGT7.
OMAiFKPAIPL.

Family and domain databases

Gene3Di3.40.50.850. 1 hit.
InterProiIPR000868. Isochorismatase-like.
[Graphical view]
PfamiPF00857. Isochorismatase. 1 hit.
[Graphical view]
SUPFAMiSSF52499. SSF52499. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4QGT7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRLMPHYSK GKTAFLCVDL QEAFSKRIEN FANCVFVANR LARLHELVPE
60 70 80 90 100
NTKYIVTEHY PKGLGRIVPG ITLPQTAHLI EKTRFSCIVP QVEELLEDVD
110 120 130 140 150
NAVVFGIEGH ACILQTVADL LDMNKRVFLP KDGLGSQKKT DFKAAMKLMG
160 170 180 190
SWSPNCEITT SESILLQMTK DAMDPNFKKI SKLLKEEPPI PL
Length:192
Mass (Da):21,586
Last modified:July 19, 2005 - v1
Checksum:i1E6B0E8CF0813E98
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796408 Genomic DNA. Translation: CAJ02379.1.
RefSeqiXP_001681611.1. XM_001681559.1.

Genome annotation databases

EnsemblProtistsiLmjF.12.0060:mRNA; LmjF.12.0060:pep; LmjF.12.0060.
GeneIDi5649891.
KEGGilma:LMJF_12_0060.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796408 Genomic DNA. Translation: CAJ02379.1.
RefSeqiXP_001681611.1. XM_001681559.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XN4X-ray3.80A1-192[»]
ProteinModelPortaliQ4QGT7.
SMRiQ4QGT7. Positions 2-192.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiLmjF.12.0060:mRNA; LmjF.12.0060:pep; LmjF.12.0060.
GeneIDi5649891.
KEGGilma:LMJF_12_0060.

Phylogenomic databases

HOGENOMiHOG000231573.
InParanoidiQ4QGT7.
OMAiFKPAIPL.

Miscellaneous databases

EvolutionaryTraceiQ4QGT7.

Family and domain databases

Gene3Di3.40.50.850. 1 hit.
InterProiIPR000868. Isochorismatase-like.
[Graphical view]
PfamiPF00857. Isochorismatase. 1 hit.
[Graphical view]
SUPFAMiSSF52499. SSF52499. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Crystal structures and proposed structural/functional classification of three protozoan proteins from the isochorismatase superfamily."
    Caruthers J., Zucker F., Worthey E., Myler P.J., Buckner F., Van Voorhuis W., Mehlin C., Boni E., Feist T., Luft J., Gulde S., Lauricella A., Kaluzhniy O., Anderson L., Le Trong I., Holmes M.A., Earnest T., Soltis M.
    , Hodgson K.O., Hol W.G., Merritt E.A.
    Protein Sci. 14:2887-2894(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.80 ANGSTROMS).
  2. "The genome of the kinetoplastid parasite, Leishmania major."
    Ivens A.C., Peacock C.S., Worthey E.A., Murphy L., Aggarwal G., Berriman M., Sisk E., Rajandream M.A., Adlem E., Aert R., Anupama A., Apostolou Z., Attipoe P., Bason N., Bauser C., Beck A., Beverley S.M., Bianchettin G.
    , Borzym K., Bothe G., Bruschi C.V., Collins M., Cadag E., Ciarloni L., Clayton C., Coulson R.M.R., Cronin A., Cruz A.K., Davies R.M., De Gaudenzi J., Dobson D.E., Duesterhoeft A., Fazelina G., Fosker N., Frasch A.C., Fraser A., Fuchs M., Gabel C., Goble A., Goffeau A., Harris D., Hertz-Fowler C., Hilbert H., Horn D., Huang Y., Klages S., Knights A., Kube M., Larke N., Litvin L., Lord A., Louie T., Marra M., Masuy D., Matthews K., Michaeli S., Mottram J.C., Mueller-Auer S., Munden H., Nelson S., Norbertczak H., Oliver K., O'neil S., Pentony M., Pohl T.M., Price C., Purnelle B., Quail M.A., Rabbinowitsch E., Reinhardt R., Rieger M., Rinta J., Robben J., Robertson L., Ruiz J.C., Rutter S., Saunders D., Schaefer M., Schein J., Schwartz D.C., Seeger K., Seyler A., Sharp S., Shin H., Sivam D., Squares R., Squares S., Tosato V., Vogt C., Volckaert G., Wambutt R., Warren T., Wedler H., Woodward J., Zhou S., Zimmermann W., Smith D.F., Blackwell J.M., Stuart K.D., Barrell B.G., Myler P.J.
    Science 309:436-442(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/IL/81/FriedlinImported.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FriedlinImported.

Entry informationi

Entry nameiQ4QGT7_LEIMA
AccessioniPrimary (citable) accession number: Q4QGT7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: January 7, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.