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Q4Q960

- Q4Q960_LEIMA

UniProt

Q4Q960 - Q4Q960_LEIMA

Protein
Submitted name:

Putative DNA ligase k alpha

Gene

LMJF_26_1340

Organism
Leishmania major
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (19 Jul 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligase k alphaImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:LMJF_26_1340Imported
    OrganismiLeishmania majorImported
    Taxonomic identifieri5664 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
    ProteomesiUP000000542: Chromosome 26

    Structurei

    3D structure databases

    ProteinModelPortaliQ4Q960.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000258022.
    KOiK01971.
    OMAiTRNLLPM.

    Family and domain databases

    Gene3Di2.40.50.140. 2 hits.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR025487. DUF4379.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    PF14311. DUF4379. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4Q960-1 [UniParc]FASTAAdd to Basket

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    MKATVLRRLG GSGLVGHPTL LRLRAVKRAA TAKVKGTARS GRAKEVAVPA    50
    AGSGHGSHKL SLADFHPAIA RTWIAAASNK MLQPQHVAPD SRKLAWWICP 100
    SCHHQHNKRI DLHLAAGGAC PKCEAKPPLA GGASAKKSAS SSRGASNPAS 150
    PLRKKQASAA SAHAPVPAAA ALRHRCRPNS TLDTIGAPNA NLLSKSVADN 200
    QYLRVQETRN LLPMLAKSYE KERWKIAPDE VLQVSPKLDG IRCVAAYRID 250
    TKQVLFFSRS GTLFECCDDT IEPALRYLFE KDPTLVLDGE LYNDSINLVQ 300
    LGTVCKAAGK ATPPPPTAAL SGADPVSAFY NALLVATYGK TKRKGGSAPA 350
    AAVPQADAPT VIGFDQLTSA IRTTRQWRTP EVAALQRQLQ YHVFDVLYSR 400
    EFPYGRGSAV PFSVRYGVLE RLLASATAHN LANISKYNPL VLRRVPSYPC 450
    TIDAVDAVLQ AAIRVSYEGV MIRRECQGAT TAAGKDGSEK MESATKKIKR 500
    SAASSGSKAS AGASTANSDG GYGYGQRSST LLKYKVMQDA EYVIVGAVEG 550
    SGKWKGFLGS FICVTPDKKH RFTVTPASTD ADKRRMWQSW KTVYKGKALT 600
    VQYQEITADG VPRFPVGKCV RGAADGRDWL 630
    Length:630
    Mass (Da):67,588
    Last modified:July 19, 2005 - v1
    Checksum:iB8C66DBE1149AD09
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR796422 Genomic DNA. Translation: CAJ05226.1.
    RefSeqiXP_001684138.1. XM_001684086.1.

    Genome annotation databases

    EnsemblProtistsiLmjF.26.1340:mRNA; LmjF.26.1340:pep; LmjF.26.1340.
    GeneIDi5652862.
    KEGGilma:LMJF_26_1340.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FR796422 Genomic DNA. Translation: CAJ05226.1 .
    RefSeqi XP_001684138.1. XM_001684086.1.

    3D structure databases

    ProteinModelPortali Q4Q960.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi LmjF.26.1340:mRNA ; LmjF.26.1340:pep ; LmjF.26.1340 .
    GeneIDi 5652862.
    KEGGi lma:LMJF_26_1340.

    Phylogenomic databases

    HOGENOMi HOG000258022.
    KOi K01971.
    OMAi TRNLLPM.

    Family and domain databases

    Gene3Di 2.40.50.140. 2 hits.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR025487. DUF4379.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    PF14311. DUF4379. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the kinetoplastid parasite, Leishmania major."
      Ivens A.C., Peacock C.S., Worthey E.A., Murphy L., Aggarwal G., Berriman M., Sisk E., Rajandream M.A., Adlem E., Aert R., Anupama A., Apostolou Z., Attipoe P., Bason N., Bauser C., Beck A., Beverley S.M., Bianchettin G.
      , Borzym K., Bothe G., Bruschi C.V., Collins M., Cadag E., Ciarloni L., Clayton C., Coulson R.M.R., Cronin A., Cruz A.K., Davies R.M., De Gaudenzi J., Dobson D.E., Duesterhoeft A., Fazelina G., Fosker N., Frasch A.C., Fraser A., Fuchs M., Gabel C., Goble A., Goffeau A., Harris D., Hertz-Fowler C., Hilbert H., Horn D., Huang Y., Klages S., Knights A., Kube M., Larke N., Litvin L., Lord A., Louie T., Marra M., Masuy D., Matthews K., Michaeli S., Mottram J.C., Mueller-Auer S., Munden H., Nelson S., Norbertczak H., Oliver K., O'neil S., Pentony M., Pohl T.M., Price C., Purnelle B., Quail M.A., Rabbinowitsch E., Reinhardt R., Rieger M., Rinta J., Robben J., Robertson L., Ruiz J.C., Rutter S., Saunders D., Schaefer M., Schein J., Schwartz D.C., Seeger K., Seyler A., Sharp S., Shin H., Sivam D., Squares R., Squares S., Tosato V., Vogt C., Volckaert G., Wambutt R., Warren T., Wedler H., Woodward J., Zhou S., Zimmermann W., Smith D.F., Blackwell J.M., Stuart K.D., Barrell B.G., Myler P.J.
      Science 309:436-442(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MHOM/IL/81/FriedlinImported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: FriedlinImported.

    Entry informationi

    Entry nameiQ4Q960_LEIMA
    AccessioniPrimary (citable) accession number: Q4Q960
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 19, 2005
    Last sequence update: July 19, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3