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Q4Q960

- Q4Q960_LEIMA

UniProt

Q4Q960 - Q4Q960_LEIMA

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Protein
Submitted name:

Putative DNA ligase k alpha

Gene

LMJF_26_1340

Organism
Leishmania major
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase k alphaImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:LMJF_26_1340Imported
OrganismiLeishmania majorImported
Taxonomic identifieri5664 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
ProteomesiUP000000542: Chromosome 26

Structurei

3D structure databases

ProteinModelPortaliQ4Q960.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000258022.
InParanoidiQ4Q960.
KOiK01971.
OMAiTRNLLPM.

Family and domain databases

Gene3Di2.40.50.140. 2 hits.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4Q960-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKATVLRRLG GSGLVGHPTL LRLRAVKRAA TAKVKGTARS GRAKEVAVPA
60 70 80 90 100
AGSGHGSHKL SLADFHPAIA RTWIAAASNK MLQPQHVAPD SRKLAWWICP
110 120 130 140 150
SCHHQHNKRI DLHLAAGGAC PKCEAKPPLA GGASAKKSAS SSRGASNPAS
160 170 180 190 200
PLRKKQASAA SAHAPVPAAA ALRHRCRPNS TLDTIGAPNA NLLSKSVADN
210 220 230 240 250
QYLRVQETRN LLPMLAKSYE KERWKIAPDE VLQVSPKLDG IRCVAAYRID
260 270 280 290 300
TKQVLFFSRS GTLFECCDDT IEPALRYLFE KDPTLVLDGE LYNDSINLVQ
310 320 330 340 350
LGTVCKAAGK ATPPPPTAAL SGADPVSAFY NALLVATYGK TKRKGGSAPA
360 370 380 390 400
AAVPQADAPT VIGFDQLTSA IRTTRQWRTP EVAALQRQLQ YHVFDVLYSR
410 420 430 440 450
EFPYGRGSAV PFSVRYGVLE RLLASATAHN LANISKYNPL VLRRVPSYPC
460 470 480 490 500
TIDAVDAVLQ AAIRVSYEGV MIRRECQGAT TAAGKDGSEK MESATKKIKR
510 520 530 540 550
SAASSGSKAS AGASTANSDG GYGYGQRSST LLKYKVMQDA EYVIVGAVEG
560 570 580 590 600
SGKWKGFLGS FICVTPDKKH RFTVTPASTD ADKRRMWQSW KTVYKGKALT
610 620 630
VQYQEITADG VPRFPVGKCV RGAADGRDWL
Length:630
Mass (Da):67,588
Last modified:July 19, 2005 - v1
Checksum:iB8C66DBE1149AD09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796422 Genomic DNA. Translation: CAJ05226.1.
RefSeqiXP_001684138.1. XM_001684086.1.

Genome annotation databases

EnsemblProtistsiLmjF.26.1340:mRNA; LmjF.26.1340:pep; LmjF.26.1340.
GeneIDi5652862.
KEGGilma:LMJF_26_1340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796422 Genomic DNA. Translation: CAJ05226.1 .
RefSeqi XP_001684138.1. XM_001684086.1.

3D structure databases

ProteinModelPortali Q4Q960.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi LmjF.26.1340:mRNA ; LmjF.26.1340:pep ; LmjF.26.1340 .
GeneIDi 5652862.
KEGGi lma:LMJF_26_1340.

Phylogenomic databases

HOGENOMi HOG000258022.
InParanoidi Q4Q960.
KOi K01971.
OMAi TRNLLPM.

Family and domain databases

Gene3Di 2.40.50.140. 2 hits.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome of the kinetoplastid parasite, Leishmania major."
    Ivens A.C., Peacock C.S., Worthey E.A., Murphy L., Aggarwal G., Berriman M., Sisk E., Rajandream M.A., Adlem E., Aert R., Anupama A., Apostolou Z., Attipoe P., Bason N., Bauser C., Beck A., Beverley S.M., Bianchettin G.
    , Borzym K., Bothe G., Bruschi C.V., Collins M., Cadag E., Ciarloni L., Clayton C., Coulson R.M.R., Cronin A., Cruz A.K., Davies R.M., De Gaudenzi J., Dobson D.E., Duesterhoeft A., Fazelina G., Fosker N., Frasch A.C., Fraser A., Fuchs M., Gabel C., Goble A., Goffeau A., Harris D., Hertz-Fowler C., Hilbert H., Horn D., Huang Y., Klages S., Knights A., Kube M., Larke N., Litvin L., Lord A., Louie T., Marra M., Masuy D., Matthews K., Michaeli S., Mottram J.C., Mueller-Auer S., Munden H., Nelson S., Norbertczak H., Oliver K., O'neil S., Pentony M., Pohl T.M., Price C., Purnelle B., Quail M.A., Rabbinowitsch E., Reinhardt R., Rieger M., Rinta J., Robben J., Robertson L., Ruiz J.C., Rutter S., Saunders D., Schaefer M., Schein J., Schwartz D.C., Seeger K., Seyler A., Sharp S., Shin H., Sivam D., Squares R., Squares S., Tosato V., Vogt C., Volckaert G., Wambutt R., Warren T., Wedler H., Woodward J., Zhou S., Zimmermann W., Smith D.F., Blackwell J.M., Stuart K.D., Barrell B.G., Myler P.J.
    Science 309:436-442(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/IL/81/FriedlinImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FriedlinImported.

Entry informationi

Entry nameiQ4Q960_LEIMA
AccessioniPrimary (citable) accession number: Q4Q960
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: October 29, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3