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Q4Q960

- Q4Q960_LEIMA

UniProt

Q4Q960 - Q4Q960_LEIMA

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Protein
Submitted name: Putative DNA ligase k alpha
Gene
LMJF_26_1340
Organism
Leishmania major
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase k alphaImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:LMJF_26_1340Imported
OrganismiLeishmania major
Taxonomic identifieri5664 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
ProteomesiUP000000542: Chromosome 26

Structurei

3D structure databases

ProteinModelPortaliQ4Q960.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000258022.
KOiK01971.
OMAiTRNLLPM.

Family and domain databases

Gene3Di2.40.50.140. 2 hits.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4Q960-1 [UniParc]FASTAAdd to Basket

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MKATVLRRLG GSGLVGHPTL LRLRAVKRAA TAKVKGTARS GRAKEVAVPA    50
AGSGHGSHKL SLADFHPAIA RTWIAAASNK MLQPQHVAPD SRKLAWWICP 100
SCHHQHNKRI DLHLAAGGAC PKCEAKPPLA GGASAKKSAS SSRGASNPAS 150
PLRKKQASAA SAHAPVPAAA ALRHRCRPNS TLDTIGAPNA NLLSKSVADN 200
QYLRVQETRN LLPMLAKSYE KERWKIAPDE VLQVSPKLDG IRCVAAYRID 250
TKQVLFFSRS GTLFECCDDT IEPALRYLFE KDPTLVLDGE LYNDSINLVQ 300
LGTVCKAAGK ATPPPPTAAL SGADPVSAFY NALLVATYGK TKRKGGSAPA 350
AAVPQADAPT VIGFDQLTSA IRTTRQWRTP EVAALQRQLQ YHVFDVLYSR 400
EFPYGRGSAV PFSVRYGVLE RLLASATAHN LANISKYNPL VLRRVPSYPC 450
TIDAVDAVLQ AAIRVSYEGV MIRRECQGAT TAAGKDGSEK MESATKKIKR 500
SAASSGSKAS AGASTANSDG GYGYGQRSST LLKYKVMQDA EYVIVGAVEG 550
SGKWKGFLGS FICVTPDKKH RFTVTPASTD ADKRRMWQSW KTVYKGKALT 600
VQYQEITADG VPRFPVGKCV RGAADGRDWL 630
Length:630
Mass (Da):67,588
Last modified:July 19, 2005 - v1
Checksum:iB8C66DBE1149AD09
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FR796422 Genomic DNA. Translation: CAJ05226.1.
RefSeqiXP_001684138.1. XM_001684086.1.

Genome annotation databases

EnsemblProtistsiLmjF.26.1340:mRNA; LmjF.26.1340:pep; LmjF.26.1340.
GeneIDi5652862.
KEGGilma:LMJF_26_1340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FR796422 Genomic DNA. Translation: CAJ05226.1 .
RefSeqi XP_001684138.1. XM_001684086.1.

3D structure databases

ProteinModelPortali Q4Q960.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi LmjF.26.1340:mRNA ; LmjF.26.1340:pep ; LmjF.26.1340 .
GeneIDi 5652862.
KEGGi lma:LMJF_26_1340.

Phylogenomic databases

HOGENOMi HOG000258022.
KOi K01971.
OMAi TRNLLPM.

Family and domain databases

Gene3Di 2.40.50.140. 2 hits.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome of the kinetoplastid parasite, Leishmania major."
    Ivens A.C., Peacock C.S., Worthey E.A., Murphy L., Aggarwal G., Berriman M., Sisk E., Rajandream M.A., Adlem E., Aert R., Anupama A., Apostolou Z., Attipoe P., Bason N., Bauser C., Beck A., Beverley S.M., Bianchettin G.
    , Borzym K., Bothe G., Bruschi C.V., Collins M., Cadag E., Ciarloni L., Clayton C., Coulson R.M.R., Cronin A., Cruz A.K., Davies R.M., De Gaudenzi J., Dobson D.E., Duesterhoeft A., Fazelina G., Fosker N., Frasch A.C., Fraser A., Fuchs M., Gabel C., Goble A., Goffeau A., Harris D., Hertz-Fowler C., Hilbert H., Horn D., Huang Y., Klages S., Knights A., Kube M., Larke N., Litvin L., Lord A., Louie T., Marra M., Masuy D., Matthews K., Michaeli S., Mottram J.C., Mueller-Auer S., Munden H., Nelson S., Norbertczak H., Oliver K., O'neil S., Pentony M., Pohl T.M., Price C., Purnelle B., Quail M.A., Rabbinowitsch E., Reinhardt R., Rieger M., Rinta J., Robben J., Robertson L., Ruiz J.C., Rutter S., Saunders D., Schaefer M., Schein J., Schwartz D.C., Seeger K., Seyler A., Sharp S., Shin H., Sivam D., Squares R., Squares S., Tosato V., Vogt C., Volckaert G., Wambutt R., Warren T., Wedler H., Woodward J., Zhou S., Zimmermann W., Smith D.F., Blackwell J.M., Stuart K.D., Barrell B.G., Myler P.J.
    Science 309:436-442(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/IL/81/Friedlin.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FriedlinImported.

Entry informationi

Entry nameiQ4Q960_LEIMA
AccessioniPrimary (citable) accession number: Q4Q960
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: June 11, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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