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Protein
Submitted name:

Putative 40S ribosomal protein S3

Gene

LMJF_15_0950

Organism
Leishmania major
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative 40S ribosomal protein S3Imported
Gene namesi
ORF Names:LMJF_15_0950Imported, LMJF_33_0920Imported
OrganismiLeishmania majorImported
Taxonomic identifieri5664 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
Proteomesi
  • UP000000542 Componentsi: Chromosome 15, Chromosome 33

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5664.LmjF.33.0920.

Structurei

3D structure databases

SMRiQ4Q4A0. Positions 4-192.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini20 – 9172KH type-2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3181. Eukaryota.
COG0092. LUCA.
HOGENOMiHOG000210611.
KOiK02985.
OMAiTIRRIMN.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
InterProiIPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR001351. Ribosomal_S3_C.
IPR005703. Ribosomal_S3_euk/arc.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01008. uS3_euk_arch. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4Q4A0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPLSKKRMI IRDGVFYAEL FEFLKRELAE EGFSGVSYHV TTLRTEIVIK
60 70 80 90 100
ATKTREVLGV NGRRIRELTA CIQQRFNYKE GKLQLYVERV EVRGLSAMAQ
110 120 130 140 150
VESLRFKLLS NLQVRRAAMG IIRYVMESGA KGCEVTVGGK IKGQRAKSMT
160 170 180 190 200
FRDGYMIKSG TAHKSFVDSA CRHCYMRAGC IGVKVKIMLP GDSTGRNGPS
210
EPLPDVITVI EPKQITASE
Length:219
Mass (Da):24,472
Last modified:July 19, 2005 - v1
Checksum:i41483365DB874330
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796411 Genomic DNA. Translation: CAJ03321.1.
FR796429 Genomic DNA. Translation: CAJ06157.1.
RefSeqiXP_001682009.1. XM_001681957.1.
XP_001685848.1. XM_001685796.1.

Genome annotation databases

EnsemblProtistsiLmjF.15.0950:mRNA; LmjF.15.0950:pep; LmjF.15.0950.
LmjF.33.0920:mRNA; LmjF.33.0920:pep; LmjF.33.0920.
GeneIDi5650476.
5654502.
KEGGilma:LMJF_15_0950.
lma:LMJF_33_0920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796411 Genomic DNA. Translation: CAJ03321.1.
FR796429 Genomic DNA. Translation: CAJ06157.1.
RefSeqiXP_001682009.1. XM_001681957.1.
XP_001685848.1. XM_001685796.1.

3D structure databases

SMRiQ4Q4A0. Positions 4-192.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5664.LmjF.33.0920.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiLmjF.15.0950:mRNA; LmjF.15.0950:pep; LmjF.15.0950.
LmjF.33.0920:mRNA; LmjF.33.0920:pep; LmjF.33.0920.
GeneIDi5650476.
5654502.
KEGGilma:LMJF_15_0950.
lma:LMJF_33_0920.

Phylogenomic databases

eggNOGiKOG3181. Eukaryota.
COG0092. LUCA.
HOGENOMiHOG000210611.
KOiK02985.
OMAiTIRRIMN.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
InterProiIPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR001351. Ribosomal_S3_C.
IPR005703. Ribosomal_S3_euk/arc.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01008. uS3_euk_arch. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ4Q4A0_LEIMA
AccessioniPrimary (citable) accession number: Q4Q4A0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: September 7, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.