Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

RuvB-like helicase

Gene

LMJF_34_3500

Organism
Leishmania major
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + H2O = ADP + phosphate.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotationSAAS annotationImported, Hydrolase

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
RuvB-like helicaseUniRule annotation (EC:3.6.4.12UniRule annotation)
Gene namesi
ORF Names:LMJF_34_3500Imported
OrganismiLeishmania majorImported
Taxonomic identifieri5664 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
Proteomesi
  • UP000000542 Componenti: Chromosome 34

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi5664.LmjF.34.3500.

Structurei

3D structure databases

ProteinModelPortaliQ4Q2J4.
SMRiQ4Q2J4. Positions 12-451.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini65 – 367303AAAInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RuvB family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1942. Eukaryota.
COG1224. LUCA.
HOGENOMiHOG000190885.
InParanoidiQ4Q2J4.
KOiK04499.
OMAiYSTSDME.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR027238. RuvB-like.
IPR010339. TIP49_C.
[Graphical view]
PANTHERiPTHR11093. PTHR11093. 1 hit.
PfamiPF06068. TIP49. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.

Sequencei

Sequence statusi: Complete.

Q4Q2J4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGIKIEEVI STTKKERVAA HSHVKGLGLN PDGTTKHIAD GFVGQEKARE
60 70 80 90 100
AAGIAVELIR SKKMAGRALL FAGPPGTGKT ALALGIAKEL GPKVPFCPMV
110 120 130 140 150
GSEVYSAEVK KTEVLMENFR RAIGLRIKEN KEVYEGEVTE LRAEETDNPL
160 170 180 190 200
GGYGKSISHV IITLKSQKGS KLLKLDAAIY ESLEKEKVSV GDVIYIEASS
210 220 230 240 250
GAVKRVGRSD AYIGDHDLEA DEYVPIPKGD VHKKKEVIQD VTLHDLDMAN
260 270 280 290 300
AKPSQGQDAL SIVSSMMRHK KTEVTEKLRQ EINKVVNKYI DQGVAELVPG
310 320 330 340 350
VLFIDEVHML DIECFTYLNK ALESTLAPVV IFATNRGSCR IRGTEIRAPH
360 370 380 390 400
GMPTDLLDRL LIIRTMNYDV SEITSIVEIR AHVEGVKISE AALTKLGIIG
410 420 430 440 450
ESTSLRFVVQ LLTPALIIAE TNGREMLEEE DVDLVAELFK DGKASARQLQ

DHAEEYVYQ
Length:459
Mass (Da):50,323
Last modified:July 19, 2005 - v1
Checksum:iD1E9AC51E1C7E604
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796430 Genomic DNA. Translation: CAJ08071.1.
RefSeqiXP_001686454.1. XM_001686402.1.

Genome annotation databases

EnsemblProtistsiLmjF.34.3500:mRNA; LmjF.34.3500:pep; LmjF.34.3500.
GeneIDi5655127.
KEGGilma:LMJF_34_3500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796430 Genomic DNA. Translation: CAJ08071.1.
RefSeqiXP_001686454.1. XM_001686402.1.

3D structure databases

ProteinModelPortaliQ4Q2J4.
SMRiQ4Q2J4. Positions 12-451.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5664.LmjF.34.3500.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiLmjF.34.3500:mRNA; LmjF.34.3500:pep; LmjF.34.3500.
GeneIDi5655127.
KEGGilma:LMJF_34_3500.

Phylogenomic databases

eggNOGiKOG1942. Eukaryota.
COG1224. LUCA.
HOGENOMiHOG000190885.
InParanoidiQ4Q2J4.
KOiK04499.
OMAiYSTSDME.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR027238. RuvB-like.
IPR010339. TIP49_C.
[Graphical view]
PANTHERiPTHR11093. PTHR11093. 1 hit.
PfamiPF06068. TIP49. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "The genome of the kinetoplastid parasite, Leishmania major."
    Ivens A.C., Peacock C.S., Worthey E.A., Murphy L., Aggarwal G., Berriman M., Sisk E., Rajandream M.A., Adlem E., Aert R., Anupama A., Apostolou Z., Attipoe P., Bason N., Bauser C., Beck A., Beverley S.M., Bianchettin G.
    , Borzym K., Bothe G., Bruschi C.V., Collins M., Cadag E., Ciarloni L., Clayton C., Coulson R.M., Cronin A., Cruz A.K., Davies R.M., De Gaudenzi J., Dobson D.E., Duesterhoeft A., Fazelina G., Fosker N., Frasch A.C., Fraser A., Fuchs M., Gabel C., Goble A., Goffeau A., Harris D., Hertz-Fowler C., Hilbert H., Horn D., Huang Y., Klages S., Knights A., Kube M., Larke N., Litvin L., Lord A., Louie T., Marra M., Masuy D., Matthews K., Michaeli S., Mottram J.C., Muller-Auer S., Munden H., Nelson S., Norbertczak H., Oliver K., O'neil S., Pentony M., Pohl T.M., Price C., Purnelle B., Quail M.A., Rabbinowitsch E., Reinhardt R., Rieger M., Rinta J., Robben J., Robertson L., Ruiz J.C., Rutter S., Saunders D., Schafer M., Schein J., Schwartz D.C., Seeger K., Seyler A., Sharp S., Shin H., Sivam D., Squares R., Squares S., Tosato V., Vogt C., Volckaert G., Wambutt R., Warren T., Wedler H., Woodward J., Zhou S., Zimmermann W., Smith D.F., Blackwell J.M., Stuart K.D., Barrell B., Myler P.J.
    Science 309:436-442(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/IL/81/FriedlinImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/IL/81/FriedlinImported.

Entry informationi

Entry nameiQ4Q2J4_LEIMA
AccessioniPrimary (citable) accession number: Q4Q2J4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: July 6, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.