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Protein
Submitted name:

Putative Transitional endoplasmic reticulum ATPase

Gene

LMJF_36_1370

Organism
Leishmania major
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative Transitional endoplasmic reticulum ATPaseImported
Gene namesi
ORF Names:LMJF_36_1370Imported
OrganismiLeishmania majorImported
Taxonomic identifieri5664 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
Proteomesi
  • UP000000542 Componenti: Chromosome 36

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5664.LmjF.36.1370.

Structurei

3D structure databases

ProteinModelPortaliQ4Q1T9.
SMRiQ4Q1T9. Positions 15-750.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 9984CDC48_NInterPro annotationAdd
BLAST
Domaini116 – 18267CDC48_2InterPro annotationAdd
BLAST
Domaini227 – 363137AAAInterPro annotationAdd
BLAST
Domaini500 – 637138AAAInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0730. Eukaryota.
COG0464. LUCA.
HOGENOMiHOG000223224.
InParanoidiQ4Q1T9.
KOiK13525.
OMAiRVTMDHF.

Family and domain databases

Gene3Di3.10.330.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR005938. AAA_ATPase_CDC48.
IPR009010. Asp_de-COase-like_dom.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR004201. Cdc48_dom2.
IPR029067. CDC48_domain_2-like.
IPR003338. CDC4_N-term_subdom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00004. AAA. 2 hits.
PF02933. CDC48_2. 1 hit.
PF02359. CDC48_N. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
SM01072. CDC48_2. 1 hit.
SM01073. CDC48_N. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.
SSF52540. SSF52540. 2 hits.
SSF54585. SSF54585. 1 hit.
TIGRFAMsiTIGR01243. CDC48. 1 hit.
PROSITEiPS00674. AAA. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4Q1T9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADAVGNTNS KVKLNKLIVE EPYNDDNSVV SLNPKRMEEL NIFRGDTVLV
60 70 80 90 100
KGKKHRSTVC IAMEDDECPP EKIKMNKVAR RNIRIHLGDT IRIMPCKDVP
110 120 130 140 150
YGNRVHLLPI DDTVENLTGD LFENFLKPYF LESYRPVKKG DSFVCRGAMR
160 170 180 190 200
SVEFKVVEVD PGDYCIVSPD TIIHSEGDPI HREDEEALDG VGYDDIGGCR
210 220 230 240 250
KQLNQIREMV ELPIRHPELF KNIGIKPPRG ILLYGPPGSG KTLIARAVAN
260 270 280 290 300
ETGAFFFLIN GPEIMSKMAG ESESNLRKAF EEAEKNAPSI IFIDEIDSIA
310 320 330 340 350
PKREKAQGEV EKRIVSQLLT LMDGMKSRSQ VIVMAATNRP NTIDPALRRF
360 370 380 390 400
GRFDRELDIG VPDETGRLEI IRIHTKNMKL ADDIDLEKVA KDSHGFVGAD
410 420 430 440 450
LAQLCTEAAM QCIREKLSII DWEDDTIDAE VMNAMCVTQE HFREAMAKTN
460 470 480 490 500
PSALRETQVE TPNVVWEDVG GLLDVKRELQ ELVQYPVEYP WKFEKYGMSP
510 520 530 540 550
PKGVLFYGPP GCGKTLLAKA IATECQANFI SIKGPELLTM WFGESEANVR
560 570 580 590 600
DVFDKARAAA PCVLFFDELD SVAKSRGAHG DGGASDRVIN QILTEMDGMN
610 620 630 640 650
VKKNVFIIGA TNRPDVLDPA IMRPGRLDQL IYIPLPDKAS RVAIIKASFR
660 670 680 690 700
KSPLASDVDV DQIAAATHGF SGADLSGICQ RACKMAIRES INKEIQLEEL
710 720 730 740 750
KKSGQLDENA DIDPVPEITR AHVEEAMRGA RRSVSDADIR RYDMFKTSLQ
760 770 780
QSRAFGASNP PPAEAAAPAG SGAPPPADDD DLYS
Length:784
Mass (Da):86,839
Last modified:July 19, 2005 - v1
Checksum:i4ADE4027E2B7D11F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796432 Genomic DNA. Translation: CAJ09090.1.
RefSeqiXP_001686709.1. XM_001686657.1.

Genome annotation databases

EnsemblProtistsiLmjF.36.1370:mRNA; LmjF.36.1370:pep; LmjF.36.1370.
GeneIDi5655391.
KEGGilma:LMJF_36_1370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796432 Genomic DNA. Translation: CAJ09090.1.
RefSeqiXP_001686709.1. XM_001686657.1.

3D structure databases

ProteinModelPortaliQ4Q1T9.
SMRiQ4Q1T9. Positions 15-750.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5664.LmjF.36.1370.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiLmjF.36.1370:mRNA; LmjF.36.1370:pep; LmjF.36.1370.
GeneIDi5655391.
KEGGilma:LMJF_36_1370.

Phylogenomic databases

eggNOGiKOG0730. Eukaryota.
COG0464. LUCA.
HOGENOMiHOG000223224.
InParanoidiQ4Q1T9.
KOiK13525.
OMAiRVTMDHF.

Family and domain databases

Gene3Di3.10.330.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR005938. AAA_ATPase_CDC48.
IPR009010. Asp_de-COase-like_dom.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR004201. Cdc48_dom2.
IPR029067. CDC48_domain_2-like.
IPR003338. CDC4_N-term_subdom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00004. AAA. 2 hits.
PF02933. CDC48_2. 1 hit.
PF02359. CDC48_N. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
SM01072. CDC48_2. 1 hit.
SM01073. CDC48_N. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.
SSF52540. SSF52540. 2 hits.
SSF54585. SSF54585. 1 hit.
TIGRFAMsiTIGR01243. CDC48. 1 hit.
PROSITEiPS00674. AAA. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of the kinetoplastid parasite, Leishmania major."
    Ivens A.C., Peacock C.S., Worthey E.A., Murphy L., Aggarwal G., Berriman M., Sisk E., Rajandream M.A., Adlem E., Aert R., Anupama A., Apostolou Z., Attipoe P., Bason N., Bauser C., Beck A., Beverley S.M., Bianchettin G.
    , Borzym K., Bothe G., Bruschi C.V., Collins M., Cadag E., Ciarloni L., Clayton C., Coulson R.M., Cronin A., Cruz A.K., Davies R.M., De Gaudenzi J., Dobson D.E., Duesterhoeft A., Fazelina G., Fosker N., Frasch A.C., Fraser A., Fuchs M., Gabel C., Goble A., Goffeau A., Harris D., Hertz-Fowler C., Hilbert H., Horn D., Huang Y., Klages S., Knights A., Kube M., Larke N., Litvin L., Lord A., Louie T., Marra M., Masuy D., Matthews K., Michaeli S., Mottram J.C., Muller-Auer S., Munden H., Nelson S., Norbertczak H., Oliver K., O'neil S., Pentony M., Pohl T.M., Price C., Purnelle B., Quail M.A., Rabbinowitsch E., Reinhardt R., Rieger M., Rinta J., Robben J., Robertson L., Ruiz J.C., Rutter S., Saunders D., Schafer M., Schein J., Schwartz D.C., Seeger K., Seyler A., Sharp S., Shin H., Sivam D., Squares R., Squares S., Tosato V., Vogt C., Volckaert G., Wambutt R., Warren T., Wedler H., Woodward J., Zhou S., Zimmermann W., Smith D.F., Blackwell J.M., Stuart K.D., Barrell B., Myler P.J.
    Science 309:436-442(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/IL/81/FriedlinImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MHOM/IL/81/FriedlinImported.

Entry informationi

Entry nameiQ4Q1T9_LEIMA
AccessioniPrimary (citable) accession number: Q4Q1T9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: July 6, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.