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Protein
Submitted name:

Fibrillarin

Gene

LMJF_36_3070

Organism
Leishmania major
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
FibrillarinImported
Gene namesi
ORF Names:LMJF_36_3070Imported
OrganismiLeishmania majorImported
Taxonomic identifieri5664 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
Proteomesi
  • UP000000542 Componenti: Chromosome 36

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5664.LmjF.36.3070.

Structurei

3D structure databases

ProteinModelPortaliQ4Q1B2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1596. Eukaryota.
COG1889. LUCA.
HOGENOMiHOG000106741.
InParanoidiQ4Q1B2.
KOiK14563.
OMAiPGVYIVI.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00351. RNA_methyltransf_FlpA. 1 hit.
InterProiIPR000692. Fibrillarin.
IPR020813. Fibrillarin_CS.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01269. Fibrillarin. 1 hit.
[Graphical view]
PIRSFiPIRSF006540. Nop17p. 1 hit.
PRINTSiPR00052. FIBRILLARIN.
SMARTiSM01206. Fibrillarin. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
PROSITEiPS00566. FIBRILLARIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4Q1B2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLHPGVFISK AKTDSLCTLN MVPGISVYGE KRIELGATQG GDDKKEYRLW
60 70 80 90 100
NPYRSKLASA IYAGVSSIHM GPGSKVLYLG GATGTTVSHV SDLVGPEGMV
110 120 130 140 150
YAVEFSHRVG RDLVEMSKRR PNIVPIVEDA RYPMKYRMLV PMVDCIFMDV
160 170 180 190 200
AQPDQARILA LNAQAFLQNG GHYVISIKAN CIDSTLEAPV VIASELNKLK
210 220 230
KDKLKPLEQV SLEPFERDHA VVVGVYRPVK KSKQ
Length:234
Mass (Da):25,787
Last modified:July 19, 2005 - v1
Checksum:i6F3EF0AA05BF82CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796432 Genomic DNA. Translation: CAJ09269.1.
RefSeqiXP_001686886.1. XM_001686834.1.

Genome annotation databases

EnsemblProtistsiLmjF.36.3070:mRNA; LmjF.36.3070:pep; LmjF.36.3070.
GeneDBiLmjF.36.3070:pep.
GeneIDi5655597.
KEGGilma:LMJF_36_3070.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796432 Genomic DNA. Translation: CAJ09269.1.
RefSeqiXP_001686886.1. XM_001686834.1.

3D structure databases

ProteinModelPortaliQ4Q1B2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5664.LmjF.36.3070.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiLmjF.36.3070:mRNA; LmjF.36.3070:pep; LmjF.36.3070.
GeneDBiLmjF.36.3070:pep.
GeneIDi5655597.
KEGGilma:LMJF_36_3070.

Phylogenomic databases

eggNOGiKOG1596. Eukaryota.
COG1889. LUCA.
HOGENOMiHOG000106741.
InParanoidiQ4Q1B2.
KOiK14563.
OMAiPGVYIVI.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00351. RNA_methyltransf_FlpA. 1 hit.
InterProiIPR000692. Fibrillarin.
IPR020813. Fibrillarin_CS.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01269. Fibrillarin. 1 hit.
[Graphical view]
PIRSFiPIRSF006540. Nop17p. 1 hit.
PRINTSiPR00052. FIBRILLARIN.
SMARTiSM01206. Fibrillarin. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
PROSITEiPS00566. FIBRILLARIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ4Q1B2_LEIMA
AccessioniPrimary (citable) accession number: Q4Q1B2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: October 5, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.