Q4PEZ2 (EIF3D_USTMA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Eukaryotic translation initiation factor 3 subunit D
Short name=eIF3d

Gene names

ORF Names:

UM01321

Organism

Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus) [Reference proteome]

Taxonomic identifier

237631 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Ustilaginomycotina › Ustilaginomycetes › Ustilaginales › Ustilaginaceae › Ustilago › Ustilago maydis

Protein attributes

Sequence length	579 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome By similarity. HAMAP-Rule MF_03003
Subunit structure	Component of the eukaryotic translation initiation factor 3 (eIF-3) complex By similarity.
Subcellular location	Cytoplasm By similarity.
Sequence similarities	Belongs to the eIF-3 subunit D family.

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm
Molecular function	Initiation factor
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	translation initiation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 579	579	Eukaryotic translation initiation factor 3 subunit D HAMAP-Rule MF_03003		PRO_0000364180

Sequences

	Sequence		Length	Mass (Da)
	Q4PEZ2 [UniParc]. Last modified July 19, 2005. Version 1. Checksum: BF686192EE085654	FASTA	579	62,882
	10 20 30 40 50 60 MASFKLPELQ PDNDLWGPAS GSNALPAELK DIPFAPYAKN DKVGRIADWN NASGASNDAA 70 80 90 100 110 120 NARGGRQGRA RDVQQNFGTS AASSAFAYFH GDDEASFSVV DNTRTVASRR GGLGQMSQRG 130 140 150 160 170 180 GRGGRGGAGG AGAAGGRGAS KFGAGAGRGA RGGRGGAAGA RRGGGRFGWK EWDKPQRIRE 190 200 210 220 230 240 ASVTVGQDWE QVEEIDFVRL GKLRLEVEEP QDISSYGSLF EYDRSYDRVT VKTAQSLSSI 250 260 270 280 290 300 DRIRYNTTTS EDPVIHDISA KEDAQIYMTD SILALLMCAT RSVYSWDVII TKTADGKVFF 310 320 330 340 350 360 DKRDGGAFDY LTVNENAADP PSEASEGKEN EAAAKANAIN TPSALSLEAT YINQNFAFQV 370 380 390 400 410 420 VNEKNVYKLE HENPFYSSDE TAPLASCAYR YRKFNLSSEE SDPVELVVRT EVDAYTVGAS 430 440 450 460 470 480 KEKQLITIKS LNEFDARAQG AGGALDWRLK LDSQRGAVVA TEMKNNSFKL ARFAVQSLLA 490 500 510 520 530 540 GADSMKLGYI SRANPKDTSR HMILGTSWLK PRELAAQMAV NLSNGWGIVR TVADLARKAE 550 560 570 QGKYVLLKDP NKQTIRMYRV PANFGEENDE IVEEDEADE

References

[1]

"Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis." Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H., Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J. , Feldbruegge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L., Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N., Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G., Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A., Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M., Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E., Birren B.W. Nature 444:97-101(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 521 / FGSC 9021.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AACP01000046 Genomic DNA. Translation: EAK82184.1.
RefSeq	XP_757468.1. XM_752375.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	5270.UM01321.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblFungi	UM01321T0; UM01321P0; UM01321.
GeneID	3629393.
KEGG	uma:UM01321.1.
Phylogenomic databases
eggNOG	NOG296233.
HOGENOM	HOG000241593.
KO	K03251.
OMA	HVKDSAR.
OrthoDB	EOG46MFSX.
Family and domain databases
HAMAP	MF_03003. eIF3d.
InterPro	IPR007783. EIF-3_zeta. [Graphical view]
PANTHER	PTHR12399. PTHR12399. 1 hit.
Pfam	PF05091. eIF-3_zeta. 1 hit. [Graphical view]
PIRSF	PIRSF016281. EIF-3_zeta. 1 hit.
ProtoNet	Search...

Entry information

Entry name

EIF3D_USTMA

Accession

Primary (citable) accession number: Q4PEZ2

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 10, 2009
Last sequence update:	July 19, 2005
Last modified:	April 3, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program