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Q4PEZ2

- EIF3D_USTMA

UniProt

Q4PEZ2 - EIF3D_USTMA

Protein

Eukaryotic translation initiation factor 3 subunit D

Gene

UM01321

Organism
Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (19 Jul 2005)
      Previous versions | rss
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    Functioni

    Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.UniRule annotation

    GO - Molecular functioni

    1. translation initiation factor activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. formation of translation preinitiation complex Source: UniProtKB-HAMAP
    2. regulation of translational initiation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Initiation factor

    Keywords - Biological processi

    Protein biosynthesis

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Eukaryotic translation initiation factor 3 subunit DUniRule annotation
    Short name:
    eIF3dUniRule annotation
    Gene namesi
    ORF Names:UM01321
    OrganismiUstilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
    Taxonomic identifieri237631 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaUstilaginomycotinaUstilaginomycetesUstilaginalesUstilaginaceaeUstilago
    ProteomesiUP000000561: Unassembled WGS sequence

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. eukaryotic 43S preinitiation complex Source: UniProtKB-HAMAP
    2. eukaryotic 48S preinitiation complex Source: UniProtKB-HAMAP
    3. eukaryotic translation initiation factor 3 complex Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 579579Eukaryotic translation initiation factor 3 subunit DPRO_0000364180Add
    BLAST

    Interactioni

    Subunit structurei

    Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.UniRule annotation

    Protein-protein interaction databases

    STRINGi5270.UM01321.1.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the eIF-3 subunit D family.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG296233.
    HOGENOMiHOG000241593.
    KOiK03251.
    OMAiYHVKDSA.
    OrthoDBiEOG78WM1S.

    Family and domain databases

    HAMAPiMF_03003. eIF3d.
    InterProiIPR007783. eIF3d.
    [Graphical view]
    PANTHERiPTHR12399. PTHR12399. 1 hit.
    PfamiPF05091. eIF-3_zeta. 1 hit.
    [Graphical view]
    PIRSFiPIRSF016281. EIF-3_zeta. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4PEZ2-1 [UniParc]FASTAAdd to Basket

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    MASFKLPELQ PDNDLWGPAS GSNALPAELK DIPFAPYAKN DKVGRIADWN    50
    NASGASNDAA NARGGRQGRA RDVQQNFGTS AASSAFAYFH GDDEASFSVV 100
    DNTRTVASRR GGLGQMSQRG GRGGRGGAGG AGAAGGRGAS KFGAGAGRGA 150
    RGGRGGAAGA RRGGGRFGWK EWDKPQRIRE ASVTVGQDWE QVEEIDFVRL 200
    GKLRLEVEEP QDISSYGSLF EYDRSYDRVT VKTAQSLSSI DRIRYNTTTS 250
    EDPVIHDISA KEDAQIYMTD SILALLMCAT RSVYSWDVII TKTADGKVFF 300
    DKRDGGAFDY LTVNENAADP PSEASEGKEN EAAAKANAIN TPSALSLEAT 350
    YINQNFAFQV VNEKNVYKLE HENPFYSSDE TAPLASCAYR YRKFNLSSEE 400
    SDPVELVVRT EVDAYTVGAS KEKQLITIKS LNEFDARAQG AGGALDWRLK 450
    LDSQRGAVVA TEMKNNSFKL ARFAVQSLLA GADSMKLGYI SRANPKDTSR 500
    HMILGTSWLK PRELAAQMAV NLSNGWGIVR TVADLARKAE QGKYVLLKDP 550
    NKQTIRMYRV PANFGEENDE IVEEDEADE 579
    Length:579
    Mass (Da):62,882
    Last modified:July 19, 2005 - v1
    Checksum:iBF686192EE085654
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACP01000046 Genomic DNA. Translation: EAK82184.1.
    RefSeqiXP_757468.1. XM_752375.1.

    Genome annotation databases

    EnsemblFungiiUM01321T0; UM01321P0; UM01321.
    GeneIDi3629393.
    KEGGiuma:UM01321.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACP01000046 Genomic DNA. Translation: EAK82184.1 .
    RefSeqi XP_757468.1. XM_752375.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5270.UM01321.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii UM01321T0 ; UM01321P0 ; UM01321 .
    GeneIDi 3629393.
    KEGGi uma:UM01321.1.

    Phylogenomic databases

    eggNOGi NOG296233.
    HOGENOMi HOG000241593.
    KOi K03251.
    OMAi YHVKDSA.
    OrthoDBi EOG78WM1S.

    Family and domain databases

    HAMAPi MF_03003. eIF3d.
    InterProi IPR007783. eIF3d.
    [Graphical view ]
    PANTHERi PTHR12399. PTHR12399. 1 hit.
    Pfami PF05091. eIF-3_zeta. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF016281. EIF-3_zeta. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis."
      Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H., Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J.
      , Feldbruegge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L., Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N., Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G., Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A., Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M., Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E., Birren B.W.
      Nature 444:97-101(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 521 / FGSC 9021.

    Entry informationi

    Entry nameiEIF3D_USTMA
    AccessioniPrimary (citable) accession number: Q4PEZ2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: July 19, 2005
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Translation initiation factors
      List of translation initiation factor entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3