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Protein

Eukaryotic translation initiation factor 3 subunit D

Gene

UM01321

Organism
Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.UniRule annotation

GO - Molecular functioni

  1. translation initiation factor activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. eukaryotic translation initiation factor 3 complex assembly Source: EnsemblFungi
  2. formation of translation preinitiation complex Source: UniProtKB-HAMAP
  3. gamma-tubulin complex localization Source: EnsemblFungi
  4. regulation of translational initiation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Initiation factor

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Eukaryotic translation initiation factor 3 subunit DUniRule annotation
Short name:
eIF3dUniRule annotation
Gene namesi
ORF Names:UM01321
OrganismiUstilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
Taxonomic identifieri237631 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaUstilaginomycotinaUstilaginomycetesUstilaginalesUstilaginaceaeUstilago

Subcellular locationi

  1. Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytosol Source: EnsemblFungi
  2. eukaryotic 43S preinitiation complex Source: UniProtKB-HAMAP
  3. eukaryotic 48S preinitiation complex Source: UniProtKB-HAMAP
  4. eukaryotic translation initiation factor 3 complex, eIF3e Source: EnsemblFungi
  5. eukaryotic translation initiation factor 3 complex, eIF3m Source: EnsemblFungi
  6. nucleus Source: EnsemblFungi
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 579579Eukaryotic translation initiation factor 3 subunit DPRO_0000364180Add
BLAST

Interactioni

Subunit structurei

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.UniRule annotation

Protein-protein interaction databases

STRINGi5270.UM01321.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the eIF-3 subunit D family.UniRule annotation

Phylogenomic databases

eggNOGiNOG296233.
HOGENOMiHOG000241593.
InParanoidiQ4PEZ2.
KOiK03251.
OMAiYHVKDSA.
OrthoDBiEOG78WM1S.

Family and domain databases

HAMAPiMF_03003. eIF3d.
InterProiIPR007783. eIF3d.
[Graphical view]
PANTHERiPTHR12399. PTHR12399. 1 hit.
PfamiPF05091. eIF-3_zeta. 1 hit.
[Graphical view]
PIRSFiPIRSF016281. EIF-3_zeta. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4PEZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASFKLPELQ PDNDLWGPAS GSNALPAELK DIPFAPYAKN DKVGRIADWN
60 70 80 90 100
NASGASNDAA NARGGRQGRA RDVQQNFGTS AASSAFAYFH GDDEASFSVV
110 120 130 140 150
DNTRTVASRR GGLGQMSQRG GRGGRGGAGG AGAAGGRGAS KFGAGAGRGA
160 170 180 190 200
RGGRGGAAGA RRGGGRFGWK EWDKPQRIRE ASVTVGQDWE QVEEIDFVRL
210 220 230 240 250
GKLRLEVEEP QDISSYGSLF EYDRSYDRVT VKTAQSLSSI DRIRYNTTTS
260 270 280 290 300
EDPVIHDISA KEDAQIYMTD SILALLMCAT RSVYSWDVII TKTADGKVFF
310 320 330 340 350
DKRDGGAFDY LTVNENAADP PSEASEGKEN EAAAKANAIN TPSALSLEAT
360 370 380 390 400
YINQNFAFQV VNEKNVYKLE HENPFYSSDE TAPLASCAYR YRKFNLSSEE
410 420 430 440 450
SDPVELVVRT EVDAYTVGAS KEKQLITIKS LNEFDARAQG AGGALDWRLK
460 470 480 490 500
LDSQRGAVVA TEMKNNSFKL ARFAVQSLLA GADSMKLGYI SRANPKDTSR
510 520 530 540 550
HMILGTSWLK PRELAAQMAV NLSNGWGIVR TVADLARKAE QGKYVLLKDP
560 570
NKQTIRMYRV PANFGEENDE IVEEDEADE
Length:579
Mass (Da):62,882
Last modified:July 19, 2005 - v1
Checksum:iBF686192EE085654
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACP01000046 Genomic DNA. Translation: EAK82184.1.

Genome annotation databases

KEGGiuma:UM01321.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACP01000046 Genomic DNA. Translation: EAK82184.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5270.UM01321.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGiuma:UM01321.1.

Phylogenomic databases

eggNOGiNOG296233.
HOGENOMiHOG000241593.
InParanoidiQ4PEZ2.
KOiK03251.
OMAiYHVKDSA.
OrthoDBiEOG78WM1S.

Family and domain databases

HAMAPiMF_03003. eIF3d.
InterProiIPR007783. eIF3d.
[Graphical view]
PANTHERiPTHR12399. PTHR12399. 1 hit.
PfamiPF05091. eIF-3_zeta. 1 hit.
[Graphical view]
PIRSFiPIRSF016281. EIF-3_zeta. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis."
    Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H., Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J.
    , Feldbruegge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L., Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N., Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G., Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A., Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M., Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E., Birren B.W.
    Nature 444:97-101(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 521 / FGSC 9021.

Entry informationi

Entry nameiEIF3D_USTMA
AccessioniPrimary (citable) accession number: Q4PEZ2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: July 19, 2005
Last modified: April 29, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.