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Q4PBW0

- Q4PBW0_USTMA

UniProt

Q4PBW0 - Q4PBW0_USTMA

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Protein
Submitted name:

Uncharacterized protein

Gene

UM02403.1

Organism
Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. tRNA-intron endonuclease activity Source: InterPro

GO - Biological processi

  1. tRNA splicing, via endonucleolytic cleavage and ligation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:UM02403.1Imported
OrganismiUstilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)Imported
Taxonomic identifieri237631 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaUstilaginomycotinaUstilaginomycetesUstilaginalesUstilaginaceaeUstilago
ProteomesiUP000000561: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. tRNA-intron endonuclease complex Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5270.UM02403.1.

Structurei

3D structure databases

ProteinModelPortaliQ4PBW0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1676.
HOGENOMiHOG000209011.
InParanoidiQ4PBW0.
KOiK15322.
OMAiVEIQHIT.
OrthoDBiEOG7SXWFH.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
InterProiIPR011856. tRNA_endonuc-like_dom.
IPR006677. tRNA_intron_Endonuc_cat-like.
IPR006678. tRNA_intron_Endonuc_N.
IPR016589. tRNA_splic_SEN2.
[Graphical view]
PfamiPF01974. tRNA_int_endo. 1 hit.
PF02778. tRNA_int_endo_N. 1 hit.
[Graphical view]
PIRSFiPIRSF011789. tRNA_splic_SEN2. 1 hit.
SUPFAMiSSF53032. SSF53032. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4PBW0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGAGKKATTQ KNQLYSKPIP IALDNSDDAD NDKISSETTL WSALCTLLTL
60 70 80 90 100
GFYARTGQSR NTVGSSTKSK EKVSVHYDRQ LQTIWVEDLD EGIRLLWQRG
110 120 130 140 150
FFGKGNLSRS EPTWRQRKVN EIDALRKGRM TAEQLTQQRR EERKALKIER
160 170 180 190 200
ARAAVRAGQQ LPDGILALGG EITDADRAPG ASHDRLMADI ERQVEEQLDG
210 220 230 240 250
EDAAEEDKKN AQELWTGQEE VPDIVPGVAR IKGLKYFAEE VKANQARKAM
260 270 280 290 300
QSTNGDDSGT AAAQDNVEDD NGTGDIDVVD FERMQLSLVE AFFLSSMFGC
310 320 330 340 350
LDIHTGEGSV DAQPLELDDF YKECLLSRLP QTLLDLRERG LADRYLTKLY
360 370 380 390 400
ARPDNPFLID YVAYHHFRSL GWTVKTGVKF CVDMLLYKRG PVFSHAEFAV
410 420 430 440 450
VVIPSYEDAQ DQESSPFALH PNAGRKDWTW FSTINRVQSQ VLKTLILAHV
460 470 480 490
FVPSSKRCRP ETLATPEAFF TSLREGKSYA VKEVAIRRWV PARMKP
Length:496
Mass (Da):55,825
Last modified:July 19, 2005 - v1
Checksum:iD36B1E4D33056FF7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACP01000083 Genomic DNA. Translation: EAK83441.1.
RefSeqiXP_758550.1. XM_753457.1.

Genome annotation databases

EnsemblFungiiUM02403T0; UM02403P0; UM02403.
GeneIDi3630459.
KEGGiuma:UM02403.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACP01000083 Genomic DNA. Translation: EAK83441.1 .
RefSeqi XP_758550.1. XM_753457.1.

3D structure databases

ProteinModelPortali Q4PBW0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5270.UM02403.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii UM02403T0 ; UM02403P0 ; UM02403 .
GeneIDi 3630459.
KEGGi uma:UM02403.1.

Phylogenomic databases

eggNOGi COG1676.
HOGENOMi HOG000209011.
InParanoidi Q4PBW0.
KOi K15322.
OMAi VEIQHIT.
OrthoDBi EOG7SXWFH.

Family and domain databases

Gene3Di 3.40.1350.10. 1 hit.
InterProi IPR011856. tRNA_endonuc-like_dom.
IPR006677. tRNA_intron_Endonuc_cat-like.
IPR006678. tRNA_intron_Endonuc_N.
IPR016589. tRNA_splic_SEN2.
[Graphical view ]
Pfami PF01974. tRNA_int_endo. 1 hit.
PF02778. tRNA_int_endo_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF011789. tRNA_splic_SEN2. 1 hit.
SUPFAMi SSF53032. SSF53032. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis."
    Kamper J., Kahmann R., Bolker M., Ma L.J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Muller O., Perlin M.H., Wosten H.A., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J.
    , Feldbrugge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M., Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., Mendoza-Mendoza A., Greilinger D., Munch K., Rossel N., Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., Ho E.C., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., Schreier P.H., Hauser-Hahn I., Vaupel M., Koopmann E., Friedrich G., Voss H., Schluter T., Margolis J., Platt D., Swimmer C., Gnirke A., Chen F., Vysotskaia V., Mannhaupt G., Guldener U., Munsterkotter M., Haase D., Oesterheld M., Mewes H.W., Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S., Jaffe D.B., Calvo S., Nusbaum C., Galagan J., Birren B.W.
    Nature 444:97-101(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 521 / FGSC 9021Imported.

Entry informationi

Entry nameiQ4PBW0_USTMA
AccessioniPrimary (citable) accession number: Q4PBW0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: October 29, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3