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Q4PBW0

- Q4PBW0_USTMA

UniProt

Q4PBW0 - Q4PBW0_USTMA

Protein
Submitted name:

Uncharacterized protein

Gene

UM02403.1

Organism
Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (19 Jul 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. nucleic acid binding Source: InterPro
    2. tRNA-intron endonuclease activity Source: InterPro

    GO - Biological processi

    1. tRNA splicing, via endonucleolytic cleavage and ligation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    ORF Names:UM02403.1Imported
    OrganismiUstilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)Imported
    Taxonomic identifieri237631 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaUstilaginomycotinaUstilaginomycetesUstilaginalesUstilaginaceaeUstilago
    ProteomesiUP000000561: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. tRNA-intron endonuclease complex Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi5270.UM02403.1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4PBW0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1676.
    HOGENOMiHOG000209011.
    KOiK15322.
    OMAiVEIQHIT.
    OrthoDBiEOG7SXWFH.

    Family and domain databases

    Gene3Di3.40.1350.10. 1 hit.
    InterProiIPR011856. tRNA_endonuc-like_dom.
    IPR006677. tRNA_intron_Endonuc_cat-like.
    IPR006678. tRNA_intron_Endonuc_N.
    IPR016589. tRNA_splic_SEN2.
    [Graphical view]
    PfamiPF01974. tRNA_int_endo. 1 hit.
    PF02778. tRNA_int_endo_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF011789. tRNA_splic_SEN2. 1 hit.
    SUPFAMiSSF53032. SSF53032. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4PBW0-1 [UniParc]FASTAAdd to Basket

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    MGAGKKATTQ KNQLYSKPIP IALDNSDDAD NDKISSETTL WSALCTLLTL    50
    GFYARTGQSR NTVGSSTKSK EKVSVHYDRQ LQTIWVEDLD EGIRLLWQRG 100
    FFGKGNLSRS EPTWRQRKVN EIDALRKGRM TAEQLTQQRR EERKALKIER 150
    ARAAVRAGQQ LPDGILALGG EITDADRAPG ASHDRLMADI ERQVEEQLDG 200
    EDAAEEDKKN AQELWTGQEE VPDIVPGVAR IKGLKYFAEE VKANQARKAM 250
    QSTNGDDSGT AAAQDNVEDD NGTGDIDVVD FERMQLSLVE AFFLSSMFGC 300
    LDIHTGEGSV DAQPLELDDF YKECLLSRLP QTLLDLRERG LADRYLTKLY 350
    ARPDNPFLID YVAYHHFRSL GWTVKTGVKF CVDMLLYKRG PVFSHAEFAV 400
    VVIPSYEDAQ DQESSPFALH PNAGRKDWTW FSTINRVQSQ VLKTLILAHV 450
    FVPSSKRCRP ETLATPEAFF TSLREGKSYA VKEVAIRRWV PARMKP 496
    Length:496
    Mass (Da):55,825
    Last modified:July 19, 2005 - v1
    Checksum:iD36B1E4D33056FF7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACP01000083 Genomic DNA. Translation: EAK83441.1.
    RefSeqiXP_758550.1. XM_753457.1.

    Genome annotation databases

    EnsemblFungiiUM02403T0; UM02403P0; UM02403.
    GeneIDi3630459.
    KEGGiuma:UM02403.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACP01000083 Genomic DNA. Translation: EAK83441.1 .
    RefSeqi XP_758550.1. XM_753457.1.

    3D structure databases

    ProteinModelPortali Q4PBW0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5270.UM02403.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii UM02403T0 ; UM02403P0 ; UM02403 .
    GeneIDi 3630459.
    KEGGi uma:UM02403.1.

    Phylogenomic databases

    eggNOGi COG1676.
    HOGENOMi HOG000209011.
    KOi K15322.
    OMAi VEIQHIT.
    OrthoDBi EOG7SXWFH.

    Family and domain databases

    Gene3Di 3.40.1350.10. 1 hit.
    InterProi IPR011856. tRNA_endonuc-like_dom.
    IPR006677. tRNA_intron_Endonuc_cat-like.
    IPR006678. tRNA_intron_Endonuc_N.
    IPR016589. tRNA_splic_SEN2.
    [Graphical view ]
    Pfami PF01974. tRNA_int_endo. 1 hit.
    PF02778. tRNA_int_endo_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF011789. tRNA_splic_SEN2. 1 hit.
    SUPFAMi SSF53032. SSF53032. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis."
      Kamper J., Kahmann R., Bolker M., Ma L.J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Muller O., Perlin M.H., Wosten H.A., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J.
      , Feldbrugge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M., Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., Mendoza-Mendoza A., Greilinger D., Munch K., Rossel N., Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., Ho E.C., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., Schreier P.H., Hauser-Hahn I., Vaupel M., Koopmann E., Friedrich G., Voss H., Schluter T., Margolis J., Platt D., Swimmer C., Gnirke A., Chen F., Vysotskaia V., Mannhaupt G., Guldener U., Munsterkotter M., Haase D., Oesterheld M., Mewes H.W., Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S., Jaffe D.B., Calvo S., Nusbaum C., Galagan J., Birren B.W.
      Nature 444:97-101(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 521 / FGSC 9021Imported.

    Entry informationi

    Entry nameiQ4PBW0_USTMA
    AccessioniPrimary (citable) accession number: Q4PBW0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 19, 2005
    Last sequence update: July 19, 2005
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3