Q4PBW0 (Q4PBW0_USTMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EAK83441.1

Gene names

ORF Names:

UM02403.1 EMBL EAK83441.1

Organism

Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus) [Reference proteome] EMBL EAK83441.1

Taxonomic identifier

237631 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Ustilaginomycotina › Ustilaginomycetes › Ustilaginales › Ustilaginaceae › Ustilago › Ustilago maydis

Protein attributes

Sequence length	496 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAK83441.1

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC tRNA splicing, via endonucleolytic cleavage and ligation Inferred from electronic annotation. Source: InterPro
Cellular_component	tRNA-intron endonuclease complex Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro tRNA-intron endonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q4PBW0 [UniParc]. Last modified July 19, 2005. Version 1. Checksum: D36B1E4D33056FF7	FASTA	496	55,825
	10 20 30 40 50 60 MGAGKKATTQ KNQLYSKPIP IALDNSDDAD NDKISSETTL WSALCTLLTL GFYARTGQSR 70 80 90 100 110 120 NTVGSSTKSK EKVSVHYDRQ LQTIWVEDLD EGIRLLWQRG FFGKGNLSRS EPTWRQRKVN 130 140 150 160 170 180 EIDALRKGRM TAEQLTQQRR EERKALKIER ARAAVRAGQQ LPDGILALGG EITDADRAPG 190 200 210 220 230 240 ASHDRLMADI ERQVEEQLDG EDAAEEDKKN AQELWTGQEE VPDIVPGVAR IKGLKYFAEE 250 260 270 280 290 300 VKANQARKAM QSTNGDDSGT AAAQDNVEDD NGTGDIDVVD FERMQLSLVE AFFLSSMFGC 310 320 330 340 350 360 LDIHTGEGSV DAQPLELDDF YKECLLSRLP QTLLDLRERG LADRYLTKLY ARPDNPFLID 370 380 390 400 410 420 YVAYHHFRSL GWTVKTGVKF CVDMLLYKRG PVFSHAEFAV VVIPSYEDAQ DQESSPFALH 430 440 450 460 470 480 PNAGRKDWTW FSTINRVQSQ VLKTLILAHV FVPSSKRCRP ETLATPEAFF TSLREGKSYA 490 VKEVAIRRWV PARMKP

References

[1]

"Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis." Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H., Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J. , Feldbruegge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L., Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N., Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G., Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A., Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M., Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E., Birren B.W. Nature 444:97-101(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 521 / FGSC 9021.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AACP01000083 Genomic DNA. Translation: EAK83441.1.
RefSeq	XP_758550.1. XM_753457.1.
3D structure databases
ProteinModelPortal	Q4PBW0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblFungi	UM02403T0; UM02403P0; UM02403.
GeneID	3630459.
KEGG	uma:UM02403.1.
Phylogenomic databases
eggNOG	COG1676.
HOGENOM	HOG000209011.
KO	K15322.
OMA	VEEMEYL.
OrthoDB	EOG4PCF2K.
Family and domain databases
Gene3D	3.40.1350.10. 1 hit.
InterPro	IPR011856. tRNA_endonuc-like_dom. IPR006677. tRNA_intron_Endonuc_cat-like. IPR006678. tRNA_intron_Endonuc_N. IPR016589. tRNA_splic_SEN2. [Graphical view]
Pfam	PF01974. tRNA_int_endo. 1 hit. PF02778. tRNA_int_endo_N. 1 hit. [Graphical view]
PIRSF	PIRSF011789. tRNA_splic_SEN2. 1 hit.
SUPFAM	SSF53032. tRNA_int_endo_C. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q4PBW0_USTMA

Accession

Primary (citable) accession number: Q4PBW0

Entry history

Integrated into UniProtKB/TrEMBL:	July 19, 2005
Last sequence update:	July 19, 2005
Last modified:	March 6, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)