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Protein

Glutamate decarboxylase

Gene

UM06063.1

Organism
Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:UM06063.1Imported
OrganismiUstilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)Imported
Taxonomic identifieri237631 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaUstilaginomycotinaUstilaginomycetesUstilaginalesUstilaginaceaeUstilago
ProteomesiUP000000561: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi5270.UM06063.1.

Structurei

3D structure databases

ProteinModelPortaliQ4P1F0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
InParanoidiQ4P1F0.
KOiK01580.
OMAiYDIITIT.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4P1F0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLSQHIDPE ELIEQAADHP ILGLLEHPAG KHARAYHSGA HAGRYVTEPI
60 70 80 90 100
PKYKIPQKGT DAEATYELLS SELSLDGKPT LNLASFVHTW MPKEATKLMS
110 120 130 140 150
ETMMVNLCDQ DEYPATMSFH NRAVSMLADL WKAPTEKDEN GKRKPAMGVA
160 170 180 190 200
TTGSSEAIML ACLAAKKRWQ HRMKAQGKSF KEPGPNMVFG SNAQVAIEKF
210 220 230 240 250
ARYFDVEERL VPVSHESRYC LDINKAIEMV DENTICVVVI LGSTYTGHYE
260 270 280 290 300
DVEGMSKLLD EYESKTGISI PIHVDGASGA MVAPFATPEL KWSFEIARVA
310 320 330 340 350
SINTSGHKFG MVYPGLGWVL FRDNEQVPKE LIFELHYLGS VEYSFGLNFS
360 370 380 390 400
RPAHPVIGQL FNFINLGFEG YRRVMQSDLQ NARLLSRALE NSGLYQVLSE
410 420 430 440 450
IHKPVSSPSA ATGAAALIQQ AGSKLTSSTQ SHEQLNQHSA EMYRPGLPVV
460 470 480 490 500
SFRWSEDFRK RNPNLEQRWM QTLLRAKGWI VPNYNLSPDL EHIDILRVVV
510 520 530 540 550
RENLSETMIE QLVYDIITIT QSLEKQANDG GFRHLAELTS SKHDDSTAAK
560 570 580
DAEKSTGHHN AAHDKHRGGL PKDSGVQAKG YAKQC
Length:585
Mass (Da):65,161
Last modified:July 19, 2005 - v1
Checksum:i0E1FD8D97B5764DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACP01000227 Genomic DNA. Translation: EAK86947.1.
RefSeqiXP_762210.1. XM_757117.1.

Genome annotation databases

EnsemblFungiiUM06063T0; UM06063P0; UM06063.
GeneIDi3634195.
KEGGiuma:UM06063.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACP01000227 Genomic DNA. Translation: EAK86947.1.
RefSeqiXP_762210.1. XM_757117.1.

3D structure databases

ProteinModelPortaliQ4P1F0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5270.UM06063.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiUM06063T0; UM06063P0; UM06063.
GeneIDi3634195.
KEGGiuma:UM06063.1.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
InParanoidiQ4P1F0.
KOiK01580.
OMAiYDIITIT.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis."
    Kamper J., Kahmann R., Bolker M., Ma L.J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Muller O., Perlin M.H., Wosten H.A., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G., Snetselaar K., McCann M., Perez-Martin J.
    , Feldbrugge M., Basse C.W., Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M., Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L., Schirawski J., Mendoza-Mendoza A., Greilinger D., Munch K., Rossel N., Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B., Meng S., Ho E.C., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J., Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P., Schreier P.H., Hauser-Hahn I., Vaupel M., Koopmann E., Friedrich G., Voss H., Schluter T., Margolis J., Platt D., Swimmer C., Gnirke A., Chen F., Vysotskaia V., Mannhaupt G., Guldener U., Munsterkotter M., Haase D., Oesterheld M., Mewes H.W., Mauceli E.W., DeCaprio D., Wade C.M., Butler J., Young S., Jaffe D.B., Calvo S., Nusbaum C., Galagan J., Birren B.W.
    Nature 444:97-101(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 521 / FGSC 9021Imported.

Entry informationi

Entry nameiQ4P1F0_USTMA
AccessioniPrimary (citable) accession number: Q4P1F0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2005
Last sequence update: July 19, 2005
Last modified: February 4, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.