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Protein
Submitted name:

STAG1 variant protein

Gene

STAG1 variant protein

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
STAG1 variant proteinImported
Gene namesi
Name:STAG1 variant proteinImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ4LE48.

Expressioni

Gene expression databases

BgeeiENSG00000118007.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000372689.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini313 – 398SCD (stromalin conservative)InterPro annotationAdd BLAST86

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili277 – 307Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2011. Eukaryota.
COG5537. LUCA.
HOGENOMiHOG000231375.
HOVERGENiHBG057636.
KOiK06671.

Family and domain databases

InterProiIPR016024. ARM-type_fold.
IPR020839. SCD.
IPR013721. STAG.
[Graphical view]
PfamiPF08514. STAG. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 3 hits.
PROSITEiPS51425. SCD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q4LE48-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
VVQHLIILLH CERTSPAMIT SELPVLQDST NETTAHSDAG SELEETEVKG
60 70 80 90 100
KRKRGRPGRP PSTNKKPRKS PGEKSRIEAG IRGAGRGRAN GHPQQNGEGE
110 120 130 140 150
PVTLFEVVKL GKSAMQSVVD DWIESYKQDR DIALLDLINF FIQCSGCRGT
160 170 180 190 200
VRIEMFRNMQ NAEIIRKMTE EFDEDSGDYP LTMPGPQWKK FRSNFCEFIG
210 220 230 240 250
VLIRQCQYSI IYDEYMMDTV ISLLTGLSDS QVRAFRHTST LAAMKLMTAL
260 270 280 290 300
VNVALNLSIH QDNTQRQYEA ERNKMIGKRA NERLELLLQK RKELQENQDE
310 320 330 340 350
IENMMNSIFK GIFVHRYRDA IAEIRAICIE EIGVWMKMYS DAFLNDSYLK
360 370 380 390 400
YVGWTLHDRQ GEVRLKCLKA LQSLYTNREL FPKLELFTNR FKDRIVSMTL
410 420 430 440 450
DKEYDVAVEA IRLVTLILHG SEEALSNEDC ENVYHLVYSA HRPVAVAAGE
460 470 480 490 500
FLHKKLFSRH DPQAEEALAK RRGRNSPNGN LIRMLVLFFL ESELHEHAAY
510 520 530 540 550
LVDSLWESSQ ELLKDWECMT ELLLEEPVQG EEAMSDRQES ALIELMVCTI
560 570 580 590 600
RQAAEAHPPV GRGTGKRVLT AKERKTQIDD RNKLTEHFII TLPMLLSKYS
610 620 630 640 650
ADAEKVANLL QIPQYFDLEI YSTGRMEKHL DALLKQIKFV VEKHVESDVL
660 670 680 690 700
EACSKTYSIL CSEEYTIQNR VDIARSQLID EFVDRFNHSV EDLLQEGEEA
710 720 730 740 750
DDDDIYNVLS TLKRLTSFHN AHDLTKWDLF GNCYRLLKTG IEHGAMPEQI
760 770 780 790 800
VVQALQCSHY SILWQLVKIT DGSPSKEDLL VLRKTVKSFL AVCQQCLSNV
810 820 830 840 850
NTPVKEQAFM LLCDLLMIFS HQLMTGGREG LQPLVFNPDT GLQSELLSFV
860 870 880 890 900
MDHVFIDQDE ENQSMEGDEE DEANKIEALH KRRNLLAAFS KLIIYDIVDM
910 920 930 940 950
HAAADIFKHY MKYYNDYGDI IKETLSKTRQ IDKIQCAKTL ILSLQQLFNE
960 970 980 990 1000
LVQEQGPNLD RTSAHVSGIK ELARRFALTF GLDQIKTREA VATLHKDGIE
1010 1020 1030 1040 1050
FAFKYQNQKG QEYPPPNLAF LEVLSEFSSK LLRQDKKTVH SYLEKFLTEQ
1060 1070 1080 1090 1100
MMERREDVWL PLISYRNSLV TGGEDDRMSV NSGSSSSKTS SVRNKKGRPP
1110 1120 1130 1140 1150
LHKKRVEDES LDNTWLNRTD TMIQTPGPLP APQLTSTVLR ENSRPMGDQI
1160 1170 1180 1190 1200
QEPESEHGSE PDFLHNPQMQ ISWLGQPKLE DLNRKDRTGM NYMKVRTGVR
1210 1220 1230 1240 1250
HAVRGLMEED AEPIFEDVMM SSRSQLEDMN EEFEDTMVID LPPSRNRRER
1260 1270
AELRPDFFDS AAIIEDDSGF GMPMF
Length:1,275
Mass (Da):146,339
Last modified:August 2, 2005 - v1
Checksum:i670E3573E6ACBE74
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB210023 mRNA. Translation: BAE06105.1.
RefSeqiNP_005853.2. NM_005862.2.
UniGeneiHs.412586.

Genome annotation databases

GeneIDi10274.
KEGGihsa:10274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB210023 mRNA. Translation: BAE06105.1.
RefSeqiNP_005853.2. NM_005862.2.
UniGeneiHs.412586.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000372689.

Proteomic databases

PaxDbiQ4LE48.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10274.
KEGGihsa:10274.

Organism-specific databases

CTDi10274.

Phylogenomic databases

eggNOGiKOG2011. Eukaryota.
COG5537. LUCA.
HOGENOMiHOG000231375.
HOVERGENiHBG057636.
KOiK06671.

Miscellaneous databases

ChiTaRSiSTAG1. human.
GenomeRNAii10274.

Gene expression databases

BgeeiENSG00000118007.

Family and domain databases

InterProiIPR016024. ARM-type_fold.
IPR020839. SCD.
IPR013721. STAG.
[Graphical view]
PfamiPF08514. STAG. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 3 hits.
PROSITEiPS51425. SCD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ4LE48_HUMAN
AccessioniPrimary (citable) accession number: Q4LE48
Entry historyi
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: October 5, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.