Unreviewed, UniProtKB/TrEMBL Q4LE41 (Q4LE41_HUMAN)

Names and origin

Protein names

Submitted name:
    SEMA4D variant protein EMBL BAE06112.1

Gene names

Name:

SEMA4D variant protein EMBL BAE06112.1

Organism

Homo sapiens (Human) EMBL BAE06112.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	870 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 Sema domain. Spearmint SPM003659

Ontologies

Gene Ontology (GO)
Biological process	positive regulation of axonogenesis Inferred from electronic annotation. Source: Compara
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	receptor activity Inferred from electronic annotation. Source: InterPro receptor binding Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAE06112.1

Sequences

	Sequence		Length	Mass (Da)
	Q4LE41-1 [UniParc]. Last modified August 2, 2005. Version 1. Checksum: 82999474AEEE440F	FASTA	870	97,153
	10 20 30 40 50 60 SPWGRLYLMR MCTPIRGLLM ALAVMFGTAM AFAPIPRITW EHREVHLVQF HEPDIYNYSA 70 80 90 100 110 120 LLLSEDKDTL YIGAREAVFA VNALNISEKQ HEVYWKVSED KKAKCAEKGK SKQTECLNYI 130 140 150 160 170 180 RVLQPLSATS LYVCGTNAFQ PACDHLNLTS FKFLGKNEDG KGRCPFDPAH SYTSVMVDGE 190 200 210 220 230 240 LYSGTSYNFL GSEPIISRNS SHSPLRTEYA IPWLNEPSFV FADVIRKSPD SPDGEDDRVY 250 260 270 280 290 300 FFFTEVSVEY EFVFRVLIPR IARVCKGDQG GLRTLQKKWT SFLKARLICS RPDSGLVFNV 310 320 330 340 350 360 LRDVFVLRSP GLKVPVFYAL FTPQLNNVGL SAVCTYNLST AEEVFSHGKY MQSTTVEQSH 370 380 390 400 410 420 TKWVRYNGPV PKPRPGACID SEARAANYTS SLNLPDKTLQ FVKDHPLMDD SVTPIDNRPR 430 440 450 460 470 480 LIKKDVNYTQ IVVDRTQALD GTVYDVMFVS TDRGALHKAI SLEHAVHIIE ETQLFQDFEP 490 500 510 520 530 540 VQTLLLSSKK GNRFVYAGSN SGVVQAPLAF CGKHGTCEDC VLARDPYCAW SPPTATCVAL 550 560 570 580 590 600 HQTESPSRGL IQEMSGDASV CPDKSKGSYR QHFFKHGGTA ELKCSQKSNL ARVFWKFQNG 610 620 630 640 650 660 VLKAESPKYG LMGRKNLLIF NLSEGDSGVY QCLSEERVKN KTVFQVVAKH VLEVKVVPKP 670 680 690 700 710 720 VVAPTLSVVQ TEGSRIATKV LVASTQGSSP PTPAVQATSS GAITLPPKPA PTGTSCEPKI 730 740 750 760 770 780 VINTVPQLHS EKTMYLKSSD NRLLMSLFLF FFVLFLCLFF YNCYKGYLPR QCLKFRSALL 790 800 810 820 830 840 IGKKKPKSDF CDREQSLKET LVEPGSFSQQ NGEHPKPALD TGYETEQDTI TSKVPTDRED 850 860 870 SQRIDDLSAR DKPFDVKCEL KFADSDADGD

References

[1]	"Preparation of a set of expression-ready clones of mammalian long cDNAs encoding large proteins by the ORF trap cloning method." Nakajima D., Saito K., Yamakawa H., Kikuno R.F., Nakayama M., Ohara R., Okazaki N., Koga H., Nagase T., Ohara O. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Brain EMBL BAE06112.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB210030 mRNA. Translation: BAE06112.1.
IPI	IPI00023807.
UniGene	Hs.494406
3D structure databases
SMR	Q4LE41. Positions 32-656.
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000187764. Homo sapiens. [Contig view]
Phylogenomic databases
HOGENOM	Q4LE41.
HOVERGEN	Q4LE41.
Gene expression databases
ArrayExpress	Q4LE41.
Bgee	Q4LE41.
Family and domain databases
InterPro	IPR013151. Ig. IPR007110. Ig-like. IPR013783. Ig-like_fold. IPR003599. Ig_sub. IPR003659. Plexin-like. IPR002165. Plexin_repeat. IPR001627. Semaphorin/CD100_Ag. IPR015943. WD40/YVTN_repeat-like. [Graphical view]
Gene3D	G3DSA:2.60.40.10. Ig-like_fold. 1 hit. G3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
Pfam	PF00047. ig. 1 hit. PF01437. PSI. 1 hit. PF01403. Sema. 1 hit. [Graphical view]
SMART	SM00409. IG. 1 hit. SM00423. PSI. 1 hit. SM00630. Sema. 1 hit. [Graphical view]
PROSITE	PS50835. IG_LIKE. 1 hit. PS51004. SEMA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q4LE41_HUMAN

Accession

Primary (citable) accession number: Q4LE41

Entry history

Integrated into UniProtKB/TrEMBL:	August 2, 2005
Last sequence update:	August 2, 2005
Last modified:	June 16, 2009
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)