Q4L8J6 (RPIA_STAHJ) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	SH0720

Organism

Staphylococcus haemolyticus (strain JCSC1435) [Complete proteome] [HAMAP]

Taxonomic identifier

279808 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Staphylococcus

Protein attributes

Sequence length	230 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 230	230	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000017005

Sequences

	Sequence		Length	Mass (Da)
	Q4L8J6 [UniParc]. Last modified August 2, 2005. Version 1. Checksum: 34DE3823B6ADAC23	FASTA	230	25,707
	10 20 30 40 50 60 MKDSKELKIM TVDDAVAQIE DNMVLGIGTG STIELLIPKL AERIHKEQLN ITGVCTSNKS 70 80 90 100 110 120 AFIAKKLDIN VVDINDVGHV DLAIDGADEV DVNINLIKGG GGALFREKVI DEMAHRFVVL 130 140 150 160 170 180 ADESKLVNYL GESFKLPVEV DKFNWFHIAK KIEAFDDIIT ERRMSDDVPF ITDNGNYILD 190 200 210 220 230 CQLNKQIDPY QFHEYLIHLT GVLETGYFLN ITDQVIVGTQ DGVKIINKSN

References

[1]

"Whole-genome sequencing of Staphylococcus haemolyticus uncovers the extreme plasticity of its genome and the evolution of human-colonizing staphylococcal species." Takeuchi F., Watanabe S., Baba T., Yuzawa H., Ito T., Morimoto Y., Kuroda M., Cui L., Takahashi M., Ankai A., Baba S., Fukui S., Lee J.C., Hiramatsu K. J. Bacteriol. 187:7292-7308(2005) [PubMed: 16237012] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JCSC1435.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006716 Genomic DNA. Translation: BAE04029.1.
RefSeq	YP_252635.1. NC_007168.1.
3D structure databases
HSSP	HSSP built from PDB template 1LK5 based on UniProtKB O50083.
ProteinModelPortal	Q4L8J6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q4L8J6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTAT00000045948; EBSTAP00000044399; EBSTAG00000045945.
GeneID	3483740.
GenomeReviews	Gene locus SH0720 in contig AP006716_GR.
KEGG	sha:SH0720.
NMPDR	fig|279808.3.peg.353.
PATRIC	19617462. VBIStaHae67511_0707.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
GeneTree	EBGT00050000025309.
HOGENOM	HBG515603.
OMA	NLSLYVD.
PhylomeDB	Q4L8J6.
ProtClustDB	PRK13978.
Enzyme and pathway databases
BioCyc	SHAE279808:SH0720-MONOMER.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_STAHJ

Accession

Primary (citable) accession number: Q4L8J6

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	August 2, 2005
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program