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Q4L6M3

- EX7S_STAHJ

UniProt

Q4L6M3 - EX7S_STAHJ

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Protein

Exodeoxyribonuclease 7 small subunit

Gene
xseB, SH1393
Organism
Staphylococcus haemolyticus (strain JCSC1435)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity.UniRule annotation

Catalytic activityi

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation

GO - Molecular functioni

  1. exodeoxyribonuclease VII activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Exonuclease, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciSHAE279808:GJX7-1447-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Exodeoxyribonuclease 7 small subunit (EC:3.1.11.6)
Alternative name(s):
Exodeoxyribonuclease VII small subunit
Short name:
Exonuclease VII small subunit
Gene namesi
Name:xseB
Ordered Locus Names:SH1393
OrganismiStaphylococcus haemolyticus (strain JCSC1435)
Taxonomic identifieri279808 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
ProteomesiUP000000543: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. exodeoxyribonuclease VII complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7676Exodeoxyribonuclease 7 small subunitUniRule annotationPRO_0000303753Add
BLAST

Interactioni

Subunit structurei

Heterooligomer composed of large and small subunits By similarity.

Protein-protein interaction databases

STRINGi279808.SH1393.

Structurei

3D structure databases

ProteinModelPortaliQ4L6M3.

Family & Domainsi

Sequence similaritiesi

Belongs to the XseB family.

Phylogenomic databases

eggNOGiCOG1722.
HOGENOMiHOG000228798.
KOiK03602.
OMAiMAWISSF.
OrthoDBiEOG69KV31.

Family and domain databases

Gene3Di1.10.287.1040. 1 hit.
HAMAPiMF_00337. Exonuc_7_S.
InterProiIPR003761. Exonuc_VII_S.
[Graphical view]
PfamiPF02609. Exonuc_VII_S. 1 hit.
[Graphical view]
PIRSFiPIRSF006488. Exonuc_VII_S. 1 hit.
ProDomiPD028235. Exonuc_VII_S. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR01280. xseB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4L6M3-1 [UniParc]FASTAAdd to Basket

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MSKDQQSFEE MMQELENIVQ KLDNETVSLE ESLELYQRGM KLSATCDATL   50
KDAEKKVNQL IKDEAEDEEN GKEVNE 76
Length:76
Mass (Da):8,770
Last modified:August 2, 2005 - v1
Checksum:i8F5F0E30D9367C84
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006716 Genomic DNA. Translation: BAE04702.1.
RefSeqiYP_253308.1. NC_007168.1.

Genome annotation databases

EnsemblBacteriaiBAE04702; BAE04702; SH1393.
GeneIDi3483408.
KEGGisha:SH1393.
PATRICi19618899. VBIStaHae67511_1373.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006716 Genomic DNA. Translation: BAE04702.1 .
RefSeqi YP_253308.1. NC_007168.1.

3D structure databases

ProteinModelPortali Q4L6M3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 279808.SH1393.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAE04702 ; BAE04702 ; SH1393 .
GeneIDi 3483408.
KEGGi sha:SH1393.
PATRICi 19618899. VBIStaHae67511_1373.

Phylogenomic databases

eggNOGi COG1722.
HOGENOMi HOG000228798.
KOi K03602.
OMAi MAWISSF.
OrthoDBi EOG69KV31.

Enzyme and pathway databases

BioCyci SHAE279808:GJX7-1447-MONOMER.

Family and domain databases

Gene3Di 1.10.287.1040. 1 hit.
HAMAPi MF_00337. Exonuc_7_S.
InterProi IPR003761. Exonuc_VII_S.
[Graphical view ]
Pfami PF02609. Exonuc_VII_S. 1 hit.
[Graphical view ]
PIRSFi PIRSF006488. Exonuc_VII_S. 1 hit.
ProDomi PD028235. Exonuc_VII_S. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
TIGRFAMsi TIGR01280. xseB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Whole-genome sequencing of Staphylococcus haemolyticus uncovers the extreme plasticity of its genome and the evolution of human-colonizing staphylococcal species."
    Takeuchi F., Watanabe S., Baba T., Yuzawa H., Ito T., Morimoto Y., Kuroda M., Cui L., Takahashi M., Ankai A., Baba S., Fukui S., Lee J.C., Hiramatsu K.
    J. Bacteriol. 187:7292-7308(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCSC1435.

Entry informationi

Entry nameiEX7S_STAHJ
AccessioniPrimary (citable) accession number: Q4L6M3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: August 2, 2005
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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