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Protein
Submitted name:

PSGD protein

Gene

HOXB13

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PSGD proteinImported
Gene namesi
Name:HOXB13Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Nucleus UniRule annotation

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA29388.

Structurei

3D structure databases

ProteinModelPortaliQ4KR72.
SMRiQ4KR72. Positions 216-273.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

HomeoboxUniRule annotation

Phylogenomic databases

HOVERGENiHBG106958.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR022067. HoxA13_N.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
PF12284. HoxA13_N. 1 hit.
[Graphical view]
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4KR72-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPGNYATLD GAKDIEGLLG AGGGRNLVAH SPLTSHPAAP TLMPAVNYAP
60 70 80 90 100
LDLPGSAEPP KQCHPCPGVP QGTSPAPVPY GYFGGGYYSC RVSRSSLKPC
110 120 130 140 150
AQAATLAAYP AETPTAGEEY PSRPTEFAFY PGYPGTYQPM ASYLDVSVVQ
160 170 180 190 200
TLGAPGEPRH DSLLPVDSYQ SWALAGGWNS QMCCQGEQNP PGPFWKAAFA
210 220 230 240 250
DSSGQHPPDA CAFRRGRKKR TPYSKGQLRE LEREYAANKF ITKDKRRKIS
260 270 280
AATSLSERQI TIWFQNRRVK EKKVLAKVKN SATP
Length:284
Mass (Da):30,664
Last modified:August 2, 2005 - v1
Checksum:i2F159865B9C33CE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY937237 mRNA. Translation: AAY17396.1.
RefSeqiNP_006352.2. NM_006361.5.
UniGeneiHs.66731.

Genome annotation databases

GeneIDi10481.
KEGGihsa:10481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY937237 mRNA. Translation: AAY17396.1.
RefSeqiNP_006352.2. NM_006361.5.
UniGeneiHs.66731.

3D structure databases

ProteinModelPortaliQ4KR72.
SMRiQ4KR72. Positions 216-273.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

DNASUi10481.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10481.
KEGGihsa:10481.

Organism-specific databases

CTDi10481.
PharmGKBiPA29388.

Phylogenomic databases

HOVERGENiHBG106958.

Miscellaneous databases

ChiTaRSiHOXB13. human.
GenomeRNAii10481.
NextBioi39762.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR022067. HoxA13_N.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
PF12284. HoxA13_N. 1 hit.
[Graphical view]
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Discovery of a prostate-specific gene and a tumor-specific gene expressed in prostate cancer by digital differential display combined with experimental expression analysis."
    Yang D., Nelson C.C., Li D., Walker T., Chen L., Fazli L., Gleave M.E.
    Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ4KR72_HUMAN
AccessioniPrimary (citable) accession number: Q4KR72
Entry historyi
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: October 29, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.