Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ewing sarcoma breakpoint region 1

Gene

Ewsr1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Ewing sarcoma breakpoint region 1Imported
Gene namesi
Name:Ewsr1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1307258. Ewsr1.

Subcellular locationi

GO - Cellular componenti

  • Cajal body Source: RGD
  • cytoplasm Source: RGD
  • nucleolus Source: RGD

PTM / Processingi

Proteomic databases

PaxDbiQ4KM41.

Expressioni

Gene expression databases

BgeeiENSRNOG00000009437.

Structurei

3D structure databases

ProteinModelPortaliQ4KM41.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 108RRM (RNA recognition motif)InterPro annotationAdd BLAST87
Domaini179 – 210RanBP2-typeInterPro annotationAdd BLAST32

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1995. Eukaryota.
ENOG4111Q2F. LUCA.
HOGENOMiHOG000038010.
PhylomeDBiQ4KM41.

Family and domain databases

CDDicd12533. RRM_EWS. 1 hit.
InterProiView protein in InterPro
IPR034869. EWS_RRM.
IPR033109. EWSR1.
IPR000504. RRM_dom.
IPR034870. TET_fam.
IPR001876. Znf_RanBP2.
PANTHERiPTHR23238. PTHR23238. 1 hit.
PTHR23238:SF28. PTHR23238:SF28. 1 hit.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4KM41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDEGPDLDLG LPIDPDEDSD NSAVYVQGLN DSVTLDDLAD FFKQCGVVKM
60 70 80 90 100
NKRTGQPMIH IYLDKETGKP KGDATVSYED PPTAKAAVEW FDGKDFQGSK
110 120 130 140 150
LKVSLARKKP PLNSMRGGMP PREGRGMPPP LRGGPGGPGG PGGPMGRMGG
160 170 180 190 200
RGGDRGGFPP RGPRGSRGNP SGGGNVQHRA GDWQCPNPGC GNQNFAWRTE
210 220 230 240 250
CNQCKAPKPE GFLPPPFPPP GGDRGRGGPG GMRGGRGGLM DRGGPGGMFR
260 270 280 290 300
GGRGGDRGGF RGGRGMDRGG FGGGRRGGPG GPPGPLMEQM GGRRGGRGGP
310
GKMDKGEHRQ ERRDRPY
Length:317
Mass (Da):33,075
Last modified:August 2, 2005 - v1
Checksum:i7ECAA044E05B1178
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC098822 mRNA. Translation: AAH98822.1.
UniGeneiRn.52785.

Genome annotation databases

UCSCiRGD:1307258. rat.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ4KM41_RAT
AccessioniPrimary (citable) accession number: Q4KM41
Entry historyiIntegrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: July 5, 2017
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)