Q4KM27 (Q4KM27_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Similar to jumonji domain containing 2B EMBL AAH98860.1

Gene names

Name:	Kdm4b RGD 1588576
Synonyms:	LOC301128 EMBL AAH98860.1 RGD 1588576

Organism

Rattus norvegicus (Rat) EMBL AAH98860.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	240 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Sequences

	Sequence		Length	Mass (Da)
	Q4KM27 [UniParc]. Last modified August 2, 2005. Version 1. Checksum: 38D0DE8771BFB42F	FASTA	240	26,534
	10 20 30 40 50 60 MKRVSGACIQ CSYEHCSTSF HVTCAHAAGV LMEPDDWPYV VSITCLKHRA SGAGGQLLRT 70 80 90 100 110 120 VSLGQIVITK NRNGLYYRCR VIGTTAQTFY EVNFDDGSYS DNLYPESITS RDCLRLGPPP 130 140 150 160 170 180 EGELVELRWT DGNLYRARFI SMATSLIYQV EFEDGSQLTV KRADIFTLEE ELPKRVRSRL 190 200 210 220 230 240 SLSTGTPQEP SFSGDGVKAA KRPRVATVLA TTTEDTGRSP EYLAFMESLL QAQGQPGAPF

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Thymus EMBL AAH98860.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC098860 mRNA. Translation: AAH98860.1.
IPI	IPI00764063.
UniGene	Rn.219581.
3D structure databases
ProteinModelPortal	Q4KM27.
SMR	Q4KM27. Positions 58-173.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
RGD	1588576. Kdm4b.
Phylogenomic databases
HOVERGEN	HBG086744.
Gene expression databases
Genevestigator	Q4KM27.
Family and domain databases
InterPro	IPR002999. Tudor. [Graphical view]
SMART	SM00333. TUDOR. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q4KM27_RAT

Accession

Primary (citable) accession number: Q4KM27

Entry history

Integrated into UniProtKB/TrEMBL:	August 2, 2005
Last sequence update:	August 2, 2005
Last modified:	November 28, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)