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Q4KM27 (Q4KM27_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Kdm4b RGD 1588576
Synonyms:LOC301128 EMBL AAH98860.1 RGD 1588576
OrganismRattus norvegicus (Rat) EMBL AAH98860.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length240 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q4KM27 [UniParc].

Last modified August 2, 2005. Version 1.
Checksum: 38D0DE8771BFB42F

FASTA24026,534
        10         20         30         40         50         60 
MKRVSGACIQ CSYEHCSTSF HVTCAHAAGV LMEPDDWPYV VSITCLKHRA SGAGGQLLRT 

        70         80         90        100        110        120 
VSLGQIVITK NRNGLYYRCR VIGTTAQTFY EVNFDDGSYS DNLYPESITS RDCLRLGPPP 

       130        140        150        160        170        180 
EGELVELRWT DGNLYRARFI SMATSLIYQV EFEDGSQLTV KRADIFTLEE ELPKRVRSRL 

       190        200        210        220        230        240 
SLSTGTPQEP SFSGDGVKAA KRPRVATVLA TTTEDTGRSP EYLAFMESLL QAQGQPGAPF 

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Thymus EMBL AAH98860.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC098860 mRNA. Translation: AAH98860.1.
UniGeneRn.219581.

3D structure databases

ProteinModelPortalQ4KM27.
SMRQ4KM27. Positions 58-173.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD1588576. Kdm4b.

Phylogenomic databases

HOVERGENHBG086744.
PhylomeDBQ4KM27.

Gene expression databases

GenevestigatorQ4KM27.

Family and domain databases

InterProIPR002999. Tudor.
[Graphical view]
SMARTSM00333. TUDOR. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ4KM27_RAT
AccessionPrimary (citable) accession number: Q4KM27
Entry history
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: July 9, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)