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Protein
Submitted name:

High mobility group nucleosomal binding domain 2

Gene

LOC100360316

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group nucleosomal binding domain 2Imported
Submitted name:
High mobility group nucleosomal binding domain 2, isoform CRA_aImported
Submitted name:
Non-histone chromosomal protein HMG-17Imported
Gene namesi
Name:LOC100360316Imported
Synonyms:Hmgn2Imported, LOC102549131Imported
ORF Names:rCG_30810Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi620649. Hmgn2.
2322336. LOC100360316.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSRNOG00000043004.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000064333.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J1B8. Eukaryota.
ENOG410Z0UC. LUCA.
GeneTreeiENSGT00730000110660.
HOVERGENiHBG073479.
KOiK11300.
OMAiDVKASHE.

Family and domain databases

InterProiIPR000079. HMGN_fam.
[Graphical view]
PfamiPF01101. HMG14_17. 1 hit.
[Graphical view]
PRINTSiPR00925. NONHISHMG17.
SMARTiSM00527. HMG17. 1 hit.
[Graphical view]
PROSITEiPS00355. HMG14_17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4KLJ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKRKAEGDA KGDKAKVKDE PQRRSARLSA KPAPPKPEPK PKKAPAKKGE
60 70 80 90
KVPKGKKGKA DAGKDANNPA ENGDAKTDQA QKADGAGDAK
Length:90
Mass (Da):9,379
Last modified:August 2, 2005 - v1
Checksum:iB7A4F84320042378
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120071 Genomic DNA. No translation available.
BC099178 mRNA. Translation: AAH99178.1.
BC099815 mRNA. Translation: AAH99815.1.
CH473968 Genomic DNA. Translation: EDL80692.1.
CH473968 Genomic DNA. Translation: EDL80693.1.
RefSeqiNP_001020795.1. NM_001025624.2.
XP_003751635.1. XM_003751587.4.
XP_003752945.1. XM_003752897.4.
UniGeneiRn.224498.
Rn.3517.

Genome annotation databases

EnsembliENSRNOT00000082953; ENSRNOP00000074978; ENSRNOG00000051615.
GeneIDi100360316.
114637.
KEGGirno:100360316.
rno:114637.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120071 Genomic DNA. No translation available.
BC099178 mRNA. Translation: AAH99178.1.
BC099815 mRNA. Translation: AAH99815.1.
CH473968 Genomic DNA. Translation: EDL80692.1.
CH473968 Genomic DNA. Translation: EDL80693.1.
RefSeqiNP_001020795.1. NM_001025624.2.
XP_003751635.1. XM_003751587.4.
XP_003752945.1. XM_003752897.4.
UniGeneiRn.224498.
Rn.3517.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000064333.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000082953; ENSRNOP00000074978; ENSRNOG00000051615.
GeneIDi100360316.
114637.
KEGGirno:100360316.
rno:114637.

Organism-specific databases

CTDi3151.
RGDi620649. Hmgn2.
2322336. LOC100360316.

Phylogenomic databases

eggNOGiENOG410J1B8. Eukaryota.
ENOG410Z0UC. LUCA.
GeneTreeiENSGT00730000110660.
HOVERGENiHBG073479.
KOiK11300.
OMAiDVKASHE.

Gene expression databases

BgeeiENSRNOG00000043004.

Family and domain databases

InterProiIPR000079. HMGN_fam.
[Graphical view]
PfamiPF01101. HMG14_17. 1 hit.
[Graphical view]
PRINTSiPR00925. NONHISHMG17.
SMARTiSM00527. HMG17. 1 hit.
[Graphical view]
PROSITEiPS00355. HMG14_17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ4KLJ0_RAT
AccessioniPrimary (citable) accession number: Q4KLJ0
Entry historyi
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: November 30, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.