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Protein
Submitted name:

High mobility group nucleosomal binding domain 2

Gene

LOC100360316

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group nucleosomal binding domain 2Imported
Submitted name:
High mobility group nucleosomal binding domain 2, isoform CRA_aImported
Submitted name:
Non-histone chromosomal protein HMG-17Imported
Gene namesi
Name:LOC100360316Imported
Synonyms:Hmgn2Imported, LOC102549131Imported
ORF Names:rCG_30810Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi620649. Hmgn2.
2322336. LOC100360316.

Subcellular locationi

GO - Cellular componenti

Expressioni

Gene expression databases

BgeeiENSRNOG00000043004.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000064333.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J1B8. Eukaryota.
ENOG410Z0UC. LUCA.
GeneTreeiENSGT00730000110660.
HOVERGENiHBG073479.
KOiK11300.
OMAiDVKASHE.

Family and domain databases

InterProiView protein in InterPro
IPR000079. HMGN_fam.
PfamiView protein in Pfam
PF01101. HMG14_17. 1 hit.
PRINTSiPR00925. NONHISHMG17.
SMARTiView protein in SMART
SM00527. HMG17. 1 hit.
PROSITEiView protein in PROSITE
PS00355. HMG14_17. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4KLJ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKRKAEGDA KGDKAKVKDE PQRRSARLSA KPAPPKPEPK PKKAPAKKGE
60 70 80 90
KVPKGKKGKA DAGKDANNPA ENGDAKTDQA QKADGAGDAK
Length:90
Mass (Da):9,379
Last modified:August 2, 2005 - v1
Checksum:iB7A4F84320042378
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120071 Genomic DNA. No translation available.
BC099178 mRNA. Translation: AAH99178.1.
BC099815 mRNA. Translation: AAH99815.1.
CH473968 Genomic DNA. Translation: EDL80692.1.
CH473968 Genomic DNA. Translation: EDL80693.1.
RefSeqiNP_001020795.1. NM_001025624.2.
XP_003751635.1. XM_003751587.4.
XP_003752945.1. XM_003752897.4.
UniGeneiRn.224498.
Rn.3517.

Genome annotation databases

EnsembliENSRNOT00000082953; ENSRNOP00000074978; ENSRNOG00000051615.
GeneIDi100360316.
114637.
KEGGirno:100360316.
rno:114637.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120071 Genomic DNA. No translation available.
BC099178 mRNA. Translation: AAH99178.1.
BC099815 mRNA. Translation: AAH99815.1.
CH473968 Genomic DNA. Translation: EDL80692.1.
CH473968 Genomic DNA. Translation: EDL80693.1.
RefSeqiNP_001020795.1. NM_001025624.2.
XP_003751635.1. XM_003751587.4.
XP_003752945.1. XM_003752897.4.
UniGeneiRn.224498.
Rn.3517.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000064333.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000082953; ENSRNOP00000074978; ENSRNOG00000051615.
GeneIDi100360316.
114637.
KEGGirno:100360316.
rno:114637.

Organism-specific databases

CTDi3151.
RGDi620649. Hmgn2.
2322336. LOC100360316.

Phylogenomic databases

eggNOGiENOG410J1B8. Eukaryota.
ENOG410Z0UC. LUCA.
GeneTreeiENSGT00730000110660.
HOVERGENiHBG073479.
KOiK11300.
OMAiDVKASHE.

Gene expression databases

BgeeiENSRNOG00000043004.

Family and domain databases

InterProiView protein in InterPro
IPR000079. HMGN_fam.
PfamiView protein in Pfam
PF01101. HMG14_17. 1 hit.
PRINTSiPR00925. NONHISHMG17.
SMARTiView protein in SMART
SM00527. HMG17. 1 hit.
PROSITEiView protein in PROSITE
PS00355. HMG14_17. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ4KLJ0_RAT
AccessioniPrimary (citable) accession number: Q4KLJ0
Entry historyiIntegrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: April 12, 2017
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.