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Q4KKR7

- SYGA_PSEF5

UniProt

Q4KKR7 - SYGA_PSEF5

Protein

Glycine--tRNA ligase alpha subunit

Gene

glyQ

Organism
Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (02 Aug 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. glycine-tRNA ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycyl-tRNA aminoacylation Source: InterPro

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciPFLU220664:GIX8-14-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycine--tRNA ligase alpha subunitUniRule annotation (EC:6.1.1.14UniRule annotation)
    Alternative name(s):
    Glycyl-tRNA synthetase alpha subunitUniRule annotation
    Short name:
    GlyRSUniRule annotation
    Gene namesi
    Name:glyQUniRule annotation
    Ordered Locus Names:PFL_0014
    OrganismiPseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
    Taxonomic identifieri220664 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000008540: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 317317Glycine--tRNA ligase alpha subunitPRO_1000047470Add
    BLAST

    Interactioni

    Subunit structurei

    Tetramer of two alpha and two beta subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi220664.PFL_0014.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4KKR7.
    SMRiQ4KKR7. Positions 11-294.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0752.
    HOGENOMiHOG000264291.
    KOiK01878.
    OMAiDEYHASS.
    OrthoDBiEOG661H9S.

    Family and domain databases

    HAMAPiMF_00254. Gly_tRNA_synth_alpha.
    InterProiIPR006194. Gly-tRNA-synth_heterodimer.
    IPR002310. Gly-tRNA_ligase_asu.
    [Graphical view]
    PfamiPF02091. tRNA-synt_2e. 1 hit.
    [Graphical view]
    PRINTSiPR01044. TRNASYNTHGA.
    TIGRFAMsiTIGR00388. glyQ. 1 hit.
    PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4KKR7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQPTPAVRT FQDLILALQQ YWAEQGCVVL QPYDMEVGAG TFHTATFLRA    50
    IGPETWNAAY VQPSRRPTDG RYGENPNRLQ HYYQFQVVLK PNPENFQELY 100
    LGSLKHVGLD PLVHDIRFVE DNWESPTLGA WGLGWEVWLN GMEVTQFTYF 150
    QQAGGIECYP VTGEITYGLE RLAMYLQGVD SVYDLVWADG PFGKVTYGDV 200
    FHQNEVEQST YNFEHANVEK LFELFDFYES EAKRLIELDQ PLPLPSYEMV 250
    LKASHTFNLL DARRAISVTA RQQYILRVRT LARSVAQAYL LARAKLGFPM 300
    ATPDLRDEVL AKLEAAQ 317
    Length:317
    Mass (Da):36,247
    Last modified:August 2, 2005 - v1
    Checksum:i0BB3AFD6CCB2A600
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000076 Genomic DNA. Translation: AAY95432.1.
    RefSeqiYP_257166.1. NC_004129.6.

    Genome annotation databases

    EnsemblBacteriaiAAY95432; AAY95432; PFL_0014.
    GeneIDi3480614.
    KEGGipfl:PFL_0014.
    PATRICi19869133. VBIPseFlu72549_0014.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000076 Genomic DNA. Translation: AAY95432.1 .
    RefSeqi YP_257166.1. NC_004129.6.

    3D structure databases

    ProteinModelPortali Q4KKR7.
    SMRi Q4KKR7. Positions 11-294.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 220664.PFL_0014.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY95432 ; AAY95432 ; PFL_0014 .
    GeneIDi 3480614.
    KEGGi pfl:PFL_0014.
    PATRICi 19869133. VBIPseFlu72549_0014.

    Phylogenomic databases

    eggNOGi COG0752.
    HOGENOMi HOG000264291.
    KOi K01878.
    OMAi DEYHASS.
    OrthoDBi EOG661H9S.

    Enzyme and pathway databases

    BioCyci PFLU220664:GIX8-14-MONOMER.

    Family and domain databases

    HAMAPi MF_00254. Gly_tRNA_synth_alpha.
    InterProi IPR006194. Gly-tRNA-synth_heterodimer.
    IPR002310. Gly-tRNA_ligase_asu.
    [Graphical view ]
    Pfami PF02091. tRNA-synt_2e. 1 hit.
    [Graphical view ]
    PRINTSi PR01044. TRNASYNTHGA.
    TIGRFAMsi TIGR00388. glyQ. 1 hit.
    PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Pf-5 / ATCC BAA-477.

    Entry informationi

    Entry nameiSYGA_PSEF5
    AccessioniPrimary (citable) accession number: Q4KKR7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: August 2, 2005
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3