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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 component

Gene

sucA

Organism
Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciPFLU220664:GIX8-1726-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:PFL_1718Imported
OrganismiPseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)Imported
Taxonomic identifieri220664 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008540 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi220664.PFL_1718.

Structurei

3D structure databases

ProteinModelPortaliQ4KFY9.
SMRiQ4KFY9. Positions 90-943.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4KFY9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQESVMQRMW NSAYLSGSNA AYVEELYELY LHDPNAVPEE WRTYFQKLPT
60 70 80 90 100
DGSTAIDVSH STIRDHFVLL AKNQRRAQPV SAGSVSSEHE KKQVEVLRLI
110 120 130 140 150
QAYRMRGHQA AQLDPLGLWQ RPAPADLSIN HYGLTNADLD TTFRAGDLFI
160 170 180 190 200
GKEEASLREI HEALQQTYCR TIGAEFTHIT DSEQRQWFQQ RLESVRGRPT
210 220 230 240 250
YSADIKSHLL ERVTAAEGLE KYLGTKYPGT KRFGLEGGES LIPMLDELIQ
260 270 280 290 300
RSGSYGTKEV VIGMAHRGRL NVLVNTFGKN PRELFDEFEG KKKVELGSGD
310 320 330 340 350
VKYHQGFSSN VMTTGGEVHL AMAFNPSHLE IVSPVVEGSV RARQDRRNDQ
360 370 380 390 400
TGDKVLPISI HGDAAFAGQG VVMETFQMSQ TRGFRTGGTV HIVINNQVGF
410 420 430 440 450
TISNPLDSRS TEYATDVAKM IQAPILHVNG DDPEAVLFVT QLAIDYRMQY
460 470 480 490 500
KRDVVIDLVC YRRRGHNEAD EPSGTQPLMY QQIAKQRTTR ELYADRLTQG
510 520 530 540 550
GVLDAERVQA KVDEYRNALD NGLHVVKSLV KEPNKELFVD WRPYLGHTWT
560 570 580 590 600
ARHDTTFDLK TLQELSAKLL ELPEGFVVQR QVAKIYEDRQ KMQAGGLPIN
610 620 630 640 650
WGYAETMAYA TLAFEGHPIR MTGQDIGRGT FSHRHAVLHN QKDAGTYIPL
660 670 680 690 700
QHLYEGQPRF DLYDSFLSEE AVLAFEYGYS TTTPNALVIW EAQFGDFANG
710 720 730 740 750
AQVVIDQFIT SGEHKWGRLC GLTMLLPHGY EGQGPEHSSA RLERYLQLCA
760 770 780 790 800
EHNIQVCVPT TPAQIYHLLR RQVIRPLRKP LVVLTPKSLL RHKLAISTLE
810 820 830 840 850
DLAEGSFQTV IPEIDAQDPK DVGRIILCSG KVYYDLLEKR RAEGRDDIAI
860 870 880 890 900
VRIEQLYPFP EDDLIEVLAP YKNVKHIVWC QEEPMNQGAW YCSQHHMRRI
910 920 930 940
ISGHNKSLVL EYAGRDASAA PACGYASMHA EQQEKLLQDA FTV
Length:943
Mass (Da):106,564
Last modified:August 2, 2005 - v1
Checksum:iD9C6009067A3FABE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000076 Genomic DNA. Translation: AAY91013.1.
RefSeqiWP_011060052.1. NC_004129.6.
YP_258844.1. NC_004129.6.

Genome annotation databases

EnsemblBacteriaiAAY91013; AAY91013; PFL_1718.
GeneIDi3478178.
KEGGipfl:PFL_1718.
PATRICi19872665. VBIPseFlu72549_1757.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000076 Genomic DNA. Translation: AAY91013.1.
RefSeqiWP_011060052.1. NC_004129.6.
YP_258844.1. NC_004129.6.

3D structure databases

ProteinModelPortaliQ4KFY9.
SMRiQ4KFY9. Positions 90-943.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi220664.PFL_1718.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY91013; AAY91013; PFL_1718.
GeneIDi3478178.
KEGGipfl:PFL_1718.
PATRICi19872665. VBIPseFlu72549_1757.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciPFLU220664:GIX8-1726-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Pf-5 / ATCC BAA-477Imported.

Entry informationi

Entry nameiQ4KFY9_PSEF5
AccessioniPrimary (citable) accession number: Q4KFY9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: May 27, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.