Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q4KCQ3

- GLGB_PSEF5

UniProt

Q4KCQ3 - GLGB_PSEF5

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei423 – 4231NucleophileUniRule annotation
Active sitei476 – 4761Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciPFLU220664:GIX8-2888-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:PFL_2874
OrganismiPseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Taxonomic identifieri220664 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008540: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7437431,4-alpha-glucan branching enzyme GlgBPRO_0000260677Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi220664.PFL_2874.

Structurei

3D structure databases

ProteinModelPortaliQ4KCQ3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiGELSHAW.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4KCQ3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSFSNKEQGK QQPALLPSAK AIDALVRAEH RDPFAILGPH GDGAGGQFIR
60 70 80 90 100
AFLPGALSVQ VLDRDQQQVL GSLQAGEVPG LFVGHFPEAR PYLLRIQWAG
110 120 130 140 150
GEQVSEDPYS FGPLLGEMDL YLFAEGNHRD LSSCLGAQLT TVDGIDGVRF
160 170 180 190 200
AVWAPNARRV SVVGDFNIWD GRRHPMRLRH PSGVWELFIP RLQAGEAYKY
210 220 230 240 250
EILGPQGILP LKADPMALAT QLPPDTASRV APPLTIDWQD QEWMLARGER
260 270 280 290 300
QRVDAPLSIY ELHAGSWQCE VDDLGEVARQ YSWAELAERL IPYVKDLGFT
310 320 330 340 350
HIELMPIMEH PFGGSWGYQP LSQFAPSARY GSPQDFAAFI DACHQAGIGV
360 370 380 390 400
ILDWVPAHFP TDTHGLAQFD GTALYEYGNP LEGFHQDWDT LIYNLGRTEV
410 420 430 440 450
HGFMLASALH WLKHFHVDGL RVDAVASMLY RDYSRKAGEW VPNRHGGREN
460 470 480 490 500
LEAIDFLRHL NDVVALEAPG ALVIAEESTA WPGVSQRTDQ GGLGFAYKWN
510 520 530 540 550
MGWMHDSLHY IQQDPVYRAH HHNELSFGLV YAWSERFILP ISHDEVVHGK
560 570 580 590 600
HSLIDKMPGD RWQKFANLRA YLSFMWAHPG KKLLFMGCEF GQWREWNHDQ
610 620 630 640 650
QLDWYLLQYP EHRGVQQLVG DLNRLYRQYP PLHDQDDVPQ GFQWLIGDDA
660 670 680 690 700
INSVYAWLRW SKSGEPLLVV ANFTPVPRQG YRVGVPVAGR WSELLNSDSQ
710 720 730 740
LYAGSNYGNG GEAFSEEQSS HGQALSLVLN LPPLAVLILR PDS
Length:743
Mass (Da):83,646
Last modified:August 2, 2005 - v1
Checksum:i836AE2D4125950BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000076 Genomic DNA. Translation: AAY92146.1.
RefSeqiYP_259980.1. NC_004129.6.

Genome annotation databases

EnsemblBacteriaiAAY92146; AAY92146; PFL_2874.
GeneIDi3477945.
KEGGipfl:PFL_2874.
PATRICi19875049. VBIPseFlu72549_2929.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000076 Genomic DNA. Translation: AAY92146.1 .
RefSeqi YP_259980.1. NC_004129.6.

3D structure databases

ProteinModelPortali Q4KCQ3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 220664.PFL_2874.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY92146 ; AAY92146 ; PFL_2874 .
GeneIDi 3477945.
KEGGi pfl:PFL_2874.
PATRICi 19875049. VBIPseFlu72549_2929.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi GELSHAW.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci PFLU220664:GIX8-2888-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Pf-5 / ATCC BAA-477.

Entry informationi

Entry nameiGLGB_PSEF5
AccessioniPrimary (citable) accession number: Q4KCQ3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 2, 2005
Last modified: October 1, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3