Q4KCP0 (GLGA_PSEF5) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	PFL_2887

Organism

Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) [Complete proteome] [HAMAP]

Taxonomic identifier

220664 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	490 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	starch synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 490	490	Glycogen synthase HAMAP MF_00484		PRO_0000230256
Sites
	Binding site	26	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q4KCP0 [UniParc]. Last modified August 2, 2005. Version 1. Checksum: 6A4B8E99B28771C2	FASTA	490	53,174
	10 20 30 40 50 60 MLPLARPNPN RKRVLFVTSE IADLVKTGGL GDVSAALPRA MAHLHDVRVL IPGYPQVLHS 70 80 90 100 110 120 ENPIHIIGEL GGHAALPACK IGRMDMPDGL VIYVLICPEL YEREGTPYGA NNGRDWPDNH 130 140 150 160 170 180 IRFARLGLAA ADIAANLAQI HWCPDLVHAH DWPAGLAPAY MHWRGQRTPT LFTIHNLAYQ 190 200 210 220 230 240 GVVSLASCPE LGIPEHALQQ EGMEFYGKLS FLKAGMAYAS HITTVSATYA QEITTPAFGC 250 260 270 280 290 300 GLDGFLASKT QQGLLSGIPN GIDESWDAAT DAHLLTPFSI GDWDGKAANA AHVRQMFGLD 310 320 330 340 350 360 ASSGPLFAVV SRLVYQKGLD LTEAVAEFIV QSGGQIAIIG RGEPEEEQSM RALARRFPGR 370 380 390 400 410 420 IGVHIGFNET DARRMFAGSD FLLMPSRYEP CGLSQMYAQR FGSLPVARNT GGLADTIENG 430 440 450 460 470 480 VTGFLFDEST VASYQEALTR AFKVFAYPAL LNAMRCRAMA APFNWCKAVE PYAELYEQLV 490 AKALGQAARQ

References

[1]

"Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5." Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.A., Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R., Dodson R.J., Durkin A.S., Brinkac L.M., Daugherty S.C., Sullivan S.A., Rosovitz M.J., Gwinn M.L., Zhou L. , Schneider D.J., Cartinhour S.W., Nelson W.C., Weidman J., Watkins K., Tran K., Khouri H., Pierson E.A., Pierson L.S. III, Thomashow L.S., Loper J.E. Nat. Biotechnol. 23:873-878(2005) [PubMed: 15980861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Pf-5 / ATCC BAA-477.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000076 Genomic DNA. Translation: AAY92159.1.
RefSeq	YP_259993.2. NC_004129.6.
3D structure databases
ProteinModelPortal	Q4KCP0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q4KCP0.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3477958.
GenomeReviews	Gene locus PFL_2887 in contig CP000076_GR.
KEGG	pfl:PFL_2887.
NMPDR	fig|220664.3.peg.4376.
PATRIC	19875075. VBIPseFlu72549_2942.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0297.
HOGENOM	HBG596384.
OMA	HAHDWPA.
PhylomeDB	Q4KCP0.
ProtClustDB	PRK00654.
Enzyme and pathway databases
BioCyc	PFLU220664:PFL_2887-MONOMER.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_PSEF5

Accession

Primary (citable) accession number: Q4KCP0

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	August 2, 2005
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program