Reviewed, UniProtKB/Swiss-Prot Q4K8H3 (ALLC_PSEF5)

Names and origin

Protein names

Recommended name:
    Probable allantoicase
    EC=3.5.3.4
Alternative name(s):
    Allantoate amidinohydrolase

Gene names

Name:	alc
Ordered Locus Names:	PFL_4368

Organism

Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) [Complete proteome] [HAMAP]

Taxonomic identifier

220664 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	331 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813
Pathway	Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813
Sequence similarities	Belongs to the allantoicase family.

Ontologies

Keywords
Biological process	Purine metabolism
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	allantoin catabolic process Inferred from electronic annotation. Source: HAMAP purine base metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	allantoicase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 331	331	Probable allantoicase HAMAP MF_00813		PRO_0000205924

Sequences

	Sequence		Length	Mass (Da)
	Q4K8H3-1 [UniParc]. Last modified August 2, 2005. Version 1. Checksum: 1B8D414AD843EC2A	FASTA	331	36,830
	10 20 30 40 50 60 MKTNAVAFEK FVNLADARLG TKIISVTDDW FADANRLFQP TPAVWKEGIF DDNGKWMDGW 70 80 90 100 110 120 ESRRKRFEGY DSAVIRLGVA GSIKGVDIDT SFFTGNFPPS ASLEACFLAA GEPDENTQWT 130 140 150 160 170 180 EVLPAVELQG NSHHYHEIHN HQPFSHLRFN IYPDGGVARL RVYGIPYRDW SAIGDDEQVD 190 200 210 220 230 240 LAAALNGGRA LACSDEHFGR MGNLLNPGRG INMGDGWETA RRRTPGNDWV IIALGHAGEI 250 260 270 280 290 300 EKIIVDTLHF KGNYPDSCSI QGAFVKGGTD SQIETQSLFW RELLPSQKLE MHAEHSFVEQ 310 320 330 IRALGPITHV RLNVFPDGGV SRLRLLGKVK K

References

[1]

"Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5." Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.A., Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R., Dodson R.J., Durkin A.S., Brinkac L.M., Daugherty S.C., Sullivan S.A., Rosovitz M.J., Gwinn M.L., Zhou L. , Schneider D.J., Cartinhour S.W., Nelson W.C., Weidman J., Watkins K., Tran K., Khouri H., Pierson E.A., Pierson L.S. III, Thomashow L.S., Loper J.E. Nat. Biotechnol. 23:873-878(2005) [PubMed: 15980861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000076 Genomic DNA. Translation: AAY93623.1.
RefSeq	YP_261460.1.
3D structure databases
SMR	Q4K8H3. Positions 4-327.
ModBase	Search...
Protein-protein interaction databases
STRING	Q4K8H3.
Genome annotation databases
GeneID	3478491.
GenomeReviews	Gene locus PFL_4368 in contig CP000076_GR.
KEGG	pfl:PFL_4368.
NMPDR	fig|220664.3.peg.4804.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4266.
HOGENOM	HBG480577.
OMA	NSHHYHE.
PhylomeDB	Q4K8H3.
Enzyme and pathway databases
BioCyc	PFLU220664:PFL_4368-MONOMER.
Family and domain databases
HAMAP	MF_00813. Allantoicase. [Tree]
InterPro	IPR005164. Allantoicase. IPR015908. Allantoicase_dom. IPR008979. Galactose-bd-like. [Graphical view]
PANTHER	PTHR12045. Allantoicase. 1 hit.
Pfam	PF03561. Allantoicase. 2 hits. [Graphical view]
PIRSF	PIRSF016516. Allantoicase. 1 hit.
TIGRFAMs	TIGR02961. allantoicase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ALLC_PSEF5

Accession

Primary (citable) accession number: Q4K8H3

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 13, 2005
Last sequence update:	August 2, 2005
Last modified:	February 9, 2010
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)