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Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
Alternative name(s):
16S rRNA m2G1207 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
Gene namesi
Name:rsmCUniRule annotation
Ordered Locus Names:PFL_5122
OrganismiPseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Taxonomic identifieri220664 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000008540 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003697391 – 332Ribosomal RNA small subunit methyltransferase CAdd BLAST332

Proteomic databases

PRIDEiQ4K6D2.

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi220664.PFL_5122.

Structurei

3D structure databases

ProteinModelPortaliQ4K6D2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107VE0. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.
OrthoDBiPOG091H05RK.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4K6D2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTRSEVLLR QAELFQGSLL LAGLAADDLL GRLPNARGWS WHAGDQAALE
60 70 80 90 100
ARFPGRSHFG VDAPAQSFDS AVLFLPKSKD LTDYLLNALA SRLAGRELYL
110 120 130 140 150
VGEKRSGVES AAKQLNPFGK PRKLDSARHC QLWQVTVANA PEPLTLQSLA
160 170 180 190 200
QEYELPLAEG PLKVISLPGV FSHGRLDRGT ALLLEHLDHL PAGHLLDFGC
210 220 230 240 250
GAGVLGATVK RRYPDSRVTL LDVDAFAAAS SRLTLAANGL EAEVLTGDGI
260 270 280 290 300
DAAPMGLNGI LTNPPFHTGV HTDYQATENL LRKAAKHLQK GGELRVVANS
310 320 330
FLRYQPLIEE HLGPCAIKAE GQGFRIYRAK RG
Length:332
Mass (Da):35,828
Last modified:August 2, 2005 - v1
Checksum:i0D9EDA7D5F85D37C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000076 Genomic DNA. Translation: AAY94344.1.
RefSeqiWP_011063369.1. NC_004129.6.

Genome annotation databases

EnsemblBacteriaiAAY94344; AAY94344; PFL_5122.
GeneIDi3479526.
KEGGipfl:PFL_5122.
PATRICi19879703. VBIPseFlu72549_5233.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000076 Genomic DNA. Translation: AAY94344.1.
RefSeqiWP_011063369.1. NC_004129.6.

3D structure databases

ProteinModelPortaliQ4K6D2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi220664.PFL_5122.

Proteomic databases

PRIDEiQ4K6D2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY94344; AAY94344; PFL_5122.
GeneIDi3479526.
KEGGipfl:PFL_5122.
PATRICi19879703. VBIPseFlu72549_5233.

Phylogenomic databases

eggNOGiENOG4107VE0. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.
OrthoDBiPOG091H05RK.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRSMC_PSEF5
AccessioniPrimary (citable) accession number: Q4K6D2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: August 2, 2005
Last modified: November 2, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.