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Protein

30S ribosomal protein S21

Gene

rpsU

Organism
Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciPFLU220664:GIX8-5700-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S21UniRule annotation
Gene namesi
Name:rpsUUniRule annotation
Ordered Locus Names:PFL_5661
OrganismiPseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Taxonomic identifieri220664 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000008540 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 717130S ribosomal protein S21PRO_0000266735Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi220664.PFL_5661.

Structurei

3D structure databases

ProteinModelPortaliQ4K4W3.
SMRiQ4K4W3. Positions 4-54.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S21P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VCC. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157460.
KOiK02970.
OMAiRFKRSCA.
OrthoDBiPOG091H0359.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
PRINTSiPR00976. RIBOSOMALS21.
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4K4W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAVKVKENE PFDVALRRFK RSCEKAGVLA EVRSREFYEK PTSERKRKAA
60 70
AAVKRHAKKV QREQRRAVRL Y
Length:71
Mass (Da):8,386
Last modified:August 2, 2005 - v1
Checksum:i53EE85C1D3BDDCA0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000076 Genomic DNA. Translation: AAY94854.1.

Genome annotation databases

EnsemblBacteriaiAAY94854; AAY94854; PFL_5661.
KEGGipfl:PFL_5661.
PATRICi19880823. VBIPseFlu72549_5773.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000076 Genomic DNA. Translation: AAY94854.1.

3D structure databases

ProteinModelPortaliQ4K4W3.
SMRiQ4K4W3. Positions 4-54.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi220664.PFL_5661.

Protocols and materials databases

DNASUi3480036.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY94854; AAY94854; PFL_5661.
KEGGipfl:PFL_5661.
PATRICi19880823. VBIPseFlu72549_5773.

Phylogenomic databases

eggNOGiENOG4105VCC. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157460.
KOiK02970.
OMAiRFKRSCA.
OrthoDBiPOG091H0359.

Enzyme and pathway databases

BioCyciPFLU220664:GIX8-5700-MONOMER.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
PRINTSiPR00976. RIBOSOMALS21.
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS21_PSEF5
AccessioniPrimary (citable) accession number: Q4K4W3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: August 2, 2005
Last modified: September 7, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.