Q4K4J5 (Q4K4J5_PSEF5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alginate lyase EMBL AAY94970.2

Gene names

Ordered Locus Names:

PFL_5780 EMBL AAY94970.2

Organism

Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) [Complete proteome] [HAMAP]

Taxonomic identifier

220664 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	223 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL AAY94970.2
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q4K4J5 [UniParc]. Last modified October 19, 2011. Version 2. Checksum: B18A4C08E704D93D	FASTA	223	24,705
	10 20 30 40 50 60 MIDLATWNLS VPVGSPPATI DTPTLVKGFK DQYFHSDTGT LFFWSPVTGS KTENAIYPRT 70 80 90 100 110 120 ELRETYSNGT LRNWTYPEAD NLLYATLAVN QVPSSGKIVI GQIHAYNSTK PLVKVEYQYK 130 140 150 160 170 180 TSKGSGNIVA KVRLHPDDEE GRVITIAENV PMDREFSYLI HLSPGGALGV SAAGYQWDSQ 190 200 210 220 LSATWRDKPL YFKAGVYVQD NTGYTSEGGK VTFSKLDIDH NKT

References

[1]

"Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5." Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.A., Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R., Dodson R.J., Durkin A.S., Brinkac L.M., Daugherty S.C., Sullivan S.A., Rosovitz M.J., Gwinn M.L., Zhou L. , Schneider D.J., Cartinhour S.W., Nelson W.C., Weidman J., Watkins K., Tran K., Khouri H., Pierson E.A., Pierson L.S. III, Thomashow L.S., Loper J.E. Nat. Biotechnol. 23:873-878(2005) [PubMed: 15980861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Pf-5 / ATCC BAA-477.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000076 Genomic DNA. Translation: AAY94970.2.
RefSeq	YP_262838.2. NC_004129.6.
3D structure databases
ProteinModelPortal	Q4K4J5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3480152.
KEGG	pfl:PFL_5780.
PATRIC	19881065. VBIPseFlu72549_5893.
Organism-specific databases
CMR	Search...
Family and domain databases
InterPro	IPR014895. Alginate_lyase_2. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
Pfam	PF08787. Alginate_lyase2. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q4K4J5_PSEF5

Accession

Primary (citable) accession number: Q4K4J5

Entry history

Integrated into UniProtKB/TrEMBL:	August 2, 2005
Last sequence update:	October 19, 2011
Last modified:	January 25, 2012
This is version 30 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)