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Q4JUK5 (GLGB_CORJK) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
1,4-alpha-glucan branching enzyme GlgB

EC=2.4.1.18
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name=BE
Gene names
Name:glgB
Ordered Locus Names:jk1330
OrganismCorynebacterium jeikeium (strain K411) [Complete proteome] [HAMAP]
Taxonomic identifier306537 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium

Protein attributes

Sequence length711 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity. HAMAP-Rule MF_00685

Catalytic activity

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain. HAMAP-Rule MF_00685

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00685

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00685

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7117111,4-alpha-glucan branching enzyme GlgB HAMAP-Rule MF_00685
PRO_0000260648

Sites

Active site3921Nucleophile By similarity
Active site4431Proton donor By similarity

Sequences

Sequence LengthMass (Da)Tools
Q4JUK5 [UniParc].

Last modified August 2, 2005. Version 1.
Checksum: 1E7D3FCEBF334A42

FASTA71179,901
        10         20         30         40         50         60 
MNHDYHRLAE RRHHAPHDVL GAHENGDGTT TIRTVQCGAE SVAVRINGGE PVQMVPAEEY 

        70         80         90        100        110        120 
PALFTATVDY FVDTYNFEVT WAGGTAATLE DPYRRLPTVG DLDRYLIGEG RHEELWKVLG 

       130        140        150        160        170        180 
AHVVDGGVAF SVWAPHAAGV SVIGDFNGWN ANQHPLRALG SSGIWELWIP SVSAGAHYKF 

       190        200        210        220        230        240 
SITTGDGVRL DKADPMARLA EPAPATASIV VADSDYAWGD DEWLAHRAAV GVDETMSIYE 

       250        260        270        280        290        300 
MHLGSWRKGR SYRELAVELV EYVQELGYTH VELMGVSEHP FEPSWGYQVT SYYAPNNRYG 

       310        320        330        340        350        360 
GPDDLRYLID SLHRAGIGVI MDWVPGHFPK DGWALGRFDG EACYEHPDPR RGEQPDWGTY 

       370        380        390        400        410        420 
VFDFGRNEVR NFLVANALYW CKEFHIDGLR VDAVASMLYL DYSRDDWLPN QYGGRENLDA 

       430        440        450        460        470        480 
VEFLKEMNAT VHRECPGSLT IAEESTSWPG VTAPTSEGGL GFSLKWNMGW MHDSLEYIQR 

       490        500        510        520        530        540 
DPAYRSYHHN EITFSMVYAY SENYVLPISH DEVVHGKGTL WSRMPAGSAW DKAAMVRSYL 

       550        560        570        580        590        600 
AFMWAHPGKK LLFQGQEWGQ TEEWNESRGL DWHDLEGWEG EFHRGISALT SQLNKLYHSE 

       610        620        630        640        650        660 
LALGQDHAPE GFQWIASDDS TNNVLSFIRR HRGRELACVI NFSGTTQENY RIGLPQAGTW 

       670        680        690        700        710 
REVLNTDDVQ YEGAGRVNGD LHTEPTGSHG MEASAVLQIP AHTARWFVLE S 

« Hide

References

[1]"Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora."
Tauch A., Kaiser O., Hain T., Goesmann A., Weisshaar B., Albersmeier A., Bekel T., Bischoff N., Brune I., Chakraborty T., Kalinowski J., Meyer F., Rupp O., Schneiker S., Viehoever P., Puehler A.
J. Bacteriol. 187:4671-4682(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K411.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR931997 Genomic DNA. Translation: CAI37502.1.
RefSeqYP_251120.1. NC_007164.1.

3D structure databases

ProteinModelPortalQ4JUK5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING306537.jk1330.

Protein family/group databases

CAZyCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAI37502; CAI37502; jk1330.
GeneID3433834.
KEGGcjk:jk1330.
PATRIC21513604. VBICorJei31838_1350.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0296.
HOGENOMHOG000283037.
KOK00700.
OMAVACVFNF.
OrthoDBEOG6JX7GT.

Enzyme and pathway databases

BioCycCJEI306537:GJ8V-1375-MONOMER.
UniPathwayUPA00164.

Family and domain databases

Gene3D2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPMF_00685. GlgB.
InterProIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 2 hits.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsTIGR01515. branching_enzym. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGB_CORJK
AccessionPrimary (citable) accession number: Q4JUK5
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 2, 2005
Last modified: June 11, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries