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Q4JSS8 (Q4JSS8_CORJK) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
3,4-dihydroxy-2-butanone 4-phosphate synthase RuleBase RU003843
Gene names
Name:ribB EMBL CAI38129.1
Ordered Locus Names:jk1948
OrganismCorynebacterium jeikeium (strain K411) [Complete proteome] [HAMAP]
Taxonomic identifier306537 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium

Protein attributes

Sequence length250 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate By similarity. SAAS SAAS000422

Catalytic activity

D-ribulose 5-phosphate = formate + L-3,4-dihydroxybutan-2-one 4-phosphate. SAAS SAAS000422

Cofactor

Binds 2 divalent metal cations per subunit. Magnesium or manganese By similarity. SAAS SAAS000422

Pathway

Cofactor biosynthesis; riboflavin biosynthesis; 2-hydroxy-3-oxobutyl phosphate from D-ribulose 5-phosphate: step 1/1. RuleBase RU003843 SAAS SAAS000422

Subunit structure

Homodimer By similarity. SAAS SAAS000422

Sequence similarities

Belongs to the DHBP synthase family. RuleBase RU003843

Sequences

Sequence LengthMass (Da)Tools
Q4JSS8 [UniParc].

Last modified August 2, 2005. Version 1.
Checksum: A414F6C2B0B37105

FASTA25026,605
        10         20         30         40         50         60 
MTRMLTDIPQ TNDTKTTARL DAETHLTPIE DIVADIAAGK MVVLVDDEDR ENEGDLIMAA 

        70         80         90        100        110        120 
EAITPETVNF MITQGKGLLC VPMTAEHART LNLAPMVERN EDDFGTSFTV SCDAIADFGI 

       130        140        150        160        170        180 
TTGISASDRA ATINLLASGG VASNFHRPGH VFPLMAREGG VLTRIGHTEA GSDLAAMAGF 

       190        200        210        220        230        240 
APVGAIVEII GDDGEMLRLP QLVEWCAERG IALSTIERLR TYRQEQVAAG VAITQRPDGS 

       250 
PLATPMTSVK

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References

[1]"Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora."
Tauch A., Kaiser O., Hain T., Goesmann A., Weisshaar B., Albersmeier A., Bekel T., Bischoff N., Brune I., Chakraborty T., Kalinowski J., Meyer F., Rupp O., Schneiker S., Viehoever P., Puehler A.
J. Bacteriol. 187:4671-4682(2005) [PubMed: 15968079] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K411.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CR931997 Genomic DNA. Translation: CAI38129.1.
RefSeqYP_251747.1. NC_007164.1.

3D structure databases

ProteinModelPortalQ4JSS8.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ4JSS8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3433203.
GenomeReviewsGene locus jk1948 in contig CR931997_GR.
KEGGcjk:jk1948.
NMPDRfig|306537.3.peg.498.
PATRIC21514868. VBICorJei31838_1976.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0108.
HOGENOMHBG735778.
OMAGDMIFAA.

Family and domain databases

InterProIPR017945. DHBP_synth_RibB-like_a/b_dom.
IPR000422. DHBP_synthase_RibB.
[Graphical view]
Gene3DG3DSA:3.90.870.10. DHBP_synth_RibB-like_a/b_dom. 1 hit.
PfamPF00926. DHBP_synthase. 1 hit.
[Graphical view]
SUPFAMSSF55821. DHBP_synth_RibB-like_a/b_dom. 1 hit.
TIGRFAMsTIGR00506. RibB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ4JSS8_CORJK
AccessionPrimary (citable) accession number: Q4JSS8
Entry history
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: January 25, 2012
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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