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Q4JDK3

- Q4JDK3_HUMAN

UniProt

Q4JDK3 - Q4JDK3_HUMAN

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Protein
Submitted name:

Non-receptor protein tyrosine phosphatase 20 variant 15

Gene

PTPN20

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Non-receptor protein tyrosine phosphatase 20 variant 15Imported
Submitted name:
Non-receptor protein tyrosine phosphatase 20 variant 16Imported
Submitted name:
Non-receptor protein tyrosine phosphatase 20 variant 17Imported
Submitted name:
Tyrosine-protein phosphatase non-receptor type 20Imported
Gene namesi
Name:PTPN20Imported
Synonyms:PTPN20AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 10

Organism-specific databases

HGNCiHGNC:23422. PTPN20A.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134904835.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00770000120472.
HOGENOMiHOG000082478.
HOVERGENiHBG055909.
KOiK18039.

Sequencei

Sequence statusi: Complete.

Q4JDK3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MWTARGPFRR DRWSSEDEEA AGPSQALSPL LSVQHHGYSG PNERTTFWHG
60
SNEGAVSLLL RYCA
Length:64
Mass (Da):7,175
Last modified:August 2, 2005 - v1
Checksum:i875AD30357623022
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL358791 Genomic DNA. No translation available.
BX005072 Genomic DNA. No translation available.
AY704155 mRNA. Translation: AAW28794.1.
AY704156 mRNA. Translation: AAW28795.1.
AY704157 mRNA. Translation: AAW28796.1.
RefSeqiNP_001035824.1. NM_001042365.2.
XP_006717819.1. XM_006717756.1.
UniGeneiHs.440733.
Hs.499552.

Genome annotation databases

EnsembliENST00000374342; ENSP00000363462; ENSG00000204179.
ENST00000395722; ENSP00000379072; ENSG00000204179.
ENST00000508715; ENSP00000480504; ENSG00000204179.
ENST00000513159; ENSP00000477675; ENSG00000204179.
ENST00000513756; ENSP00000479990; ENSG00000204179.
GeneIDi26095.
KEGGihsa:26095.
UCSCiuc001jdu.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL358791 Genomic DNA. No translation available.
BX005072 Genomic DNA. No translation available.
AY704155 mRNA. Translation: AAW28794.1 .
AY704156 mRNA. Translation: AAW28795.1 .
AY704157 mRNA. Translation: AAW28796.1 .
RefSeqi NP_001035824.1. NM_001042365.2.
XP_006717819.1. XM_006717756.1.
UniGenei Hs.440733.
Hs.499552.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

DNASUi 26095.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000374342 ; ENSP00000363462 ; ENSG00000204179 .
ENST00000395722 ; ENSP00000379072 ; ENSG00000204179 .
ENST00000508715 ; ENSP00000480504 ; ENSG00000204179 .
ENST00000513159 ; ENSP00000477675 ; ENSG00000204179 .
ENST00000513756 ; ENSP00000479990 ; ENSG00000204179 .
GeneIDi 26095.
KEGGi hsa:26095.
UCSCi uc001jdu.1. human.

Organism-specific databases

CTDi 26095.
HGNCi HGNC:23422. PTPN20A.
PharmGKBi PA134904835.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00770000120472.
HOGENOMi HOG000082478.
HOVERGENi HBG055909.
KOi K18039.

Miscellaneous databases

NextBioi 35518473.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and comparative analysis of human chromosome 10."
    Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
    , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
    Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Protein tyrosine phosphatase hPTPN20a is targeted to sites of actin polymerization."
    Fodero-Tavoletti M.T., Hardy M.P., Cornell B., Katsis F., Sadek C.M., Mitchell C.A., Kemp B.E., Tiganis T.
    Biochem. J. 389:343-354(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (NOV-2011) to UniProtKB
    Cited for: IDENTIFICATION.
  4. Ensembl
    Submitted (SEP-2014) to UniProtKB
    Cited for: IDENTIFICATION.
  5. Ensembl
    Submitted (NOV-2014) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ4JDK3_HUMAN
AccessioniPrimary (citable) accession number: Q4JDK3
Secondary accession number(s): G8JLF9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: January 7, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.