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Q4JDK3

- Q4JDK3_HUMAN

UniProt

Q4JDK3 - Q4JDK3_HUMAN

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Protein
Submitted name:

Non-receptor protein tyrosine phosphatase 20 variant 15

Gene

PTPN20

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. protein tyrosine phosphatase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Non-receptor protein tyrosine phosphatase 20 variant 15Imported
Submitted name:
Non-receptor protein tyrosine phosphatase 20 variant 16Imported
Submitted name:
Non-receptor protein tyrosine phosphatase 20 variant 17Imported
Submitted name:
Tyrosine-protein phosphatase non-receptor type 20Imported
Gene namesi
Name:PTPN20Imported
Synonyms:PTPN20AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 10

Organism-specific databases

HGNCiHGNC:23422. PTPN20A.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134904835.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000119210.
HOGENOMiHOG000082478.
HOVERGENiHBG055909.
KOiK18039.

Family and domain databases

Gene3Di3.90.190.10. 1 hit.
InterProiIPR029021. Prot-tyrosine_phosphatase-like.
IPR000387. Tyr/Dual-sp_Pase.
IPR016130. Tyr_Pase_AS.
IPR000242. Tyr_Pase_rcpt/non-rcpt.
[Graphical view]
PfamiPF00102. Y_phosphatase. 1 hit.
[Graphical view]
PRINTSiPR00700. PRTYPHPHTASE.
SMARTiSM00194. PTPc. 1 hit.
[Graphical view]
SUPFAMiSSF52799. SSF52799. 1 hit.
PROSITEiPS00383. TYR_PHOSPHATASE_1. 1 hit.
PS50056. TYR_PHOSPHATASE_2. 1 hit.
PS50055. TYR_PHOSPHATASE_PTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4JDK3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MWTARGPFRR DRWSSEDEEA AGPSQALSPL LSVQHHGYSG PNERTTFWHG
60
SNEGAVSLLL RYCA
Length:64
Mass (Da):7,175
Last modified:August 2, 2005 - v1
Checksum:i875AD30357623022
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL358791 Genomic DNA. No translation available.
BX005072 Genomic DNA. No translation available.
AY704155 mRNA. Translation: AAW28794.1.
AY704156 mRNA. Translation: AAW28795.1.
AY704157 mRNA. Translation: AAW28796.1.
RefSeqiNP_001035824.1. NM_001042365.2.
XP_006717819.1. XM_006717756.1.
UniGeneiHs.440733.
Hs.499552.

Genome annotation databases

EnsembliENST00000374342; ENSP00000363462; ENSG00000204179.
ENST00000508715; ENSP00000480504; ENSG00000204179.
ENST00000513159; ENSP00000477675; ENSG00000204179.
ENST00000513756; ENSP00000479990; ENSG00000204179.
GeneIDi26095.
KEGGihsa:26095.
UCSCiuc001jdu.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL358791 Genomic DNA. No translation available.
BX005072 Genomic DNA. No translation available.
AY704155 mRNA. Translation: AAW28794.1 .
AY704156 mRNA. Translation: AAW28795.1 .
AY704157 mRNA. Translation: AAW28796.1 .
RefSeqi NP_001035824.1. NM_001042365.2.
XP_006717819.1. XM_006717756.1.
UniGenei Hs.440733.
Hs.499552.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

DNASUi 26095.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000374342 ; ENSP00000363462 ; ENSG00000204179 .
ENST00000508715 ; ENSP00000480504 ; ENSG00000204179 .
ENST00000513159 ; ENSP00000477675 ; ENSG00000204179 .
ENST00000513756 ; ENSP00000479990 ; ENSG00000204179 .
GeneIDi 26095.
KEGGi hsa:26095.
UCSCi uc001jdu.1. human.

Organism-specific databases

CTDi 26095.
HGNCi HGNC:23422. PTPN20A.
PharmGKBi PA134904835.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00760000119210.
HOGENOMi HOG000082478.
HOVERGENi HBG055909.
KOi K18039.

Miscellaneous databases

NextBioi 35518473.
48049.

Family and domain databases

Gene3Di 3.90.190.10. 1 hit.
InterProi IPR029021. Prot-tyrosine_phosphatase-like.
IPR000387. Tyr/Dual-sp_Pase.
IPR016130. Tyr_Pase_AS.
IPR000242. Tyr_Pase_rcpt/non-rcpt.
[Graphical view ]
Pfami PF00102. Y_phosphatase. 1 hit.
[Graphical view ]
PRINTSi PR00700. PRTYPHPHTASE.
SMARTi SM00194. PTPc. 1 hit.
[Graphical view ]
SUPFAMi SSF52799. SSF52799. 1 hit.
PROSITEi PS00383. TYR_PHOSPHATASE_1. 1 hit.
PS50056. TYR_PHOSPHATASE_2. 1 hit.
PS50055. TYR_PHOSPHATASE_PTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and comparative analysis of human chromosome 10."
    Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
    , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
    Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Protein tyrosine phosphatase hPTPN20a is targeted to sites of actin polymerization."
    Fodero-Tavoletti M.T., Hardy M.P., Cornell B., Katsis F., Sadek C.M., Mitchell C.A., Kemp B.E., Tiganis T.
    Biochem. J. 389:343-354(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (NOV-2011) to UniProtKB
    Cited for: IDENTIFICATION.
  4. Ensembl
    Submitted (SEP-2014) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ4JDK3_HUMAN
AccessioniPrimary (citable) accession number: Q4JDK3
Secondary accession number(s): G8JLF9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 2, 2005
Last sequence update: August 2, 2005
Last modified: October 29, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3