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Q4FZT1 (Q4FZT1_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cdk13 RGD 1311226
Synonyms:Cdc2l5 EMBL AAH99163.1 RGD 1311226
OrganismRattus norvegicus (Rat) EMBL AAH99163.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length513 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH99163.1

Sequences

Sequence LengthMass (Da)Tools
Q4FZT1 [UniParc].

Last modified August 30, 2005. Version 1.
Checksum: 3703B4C9FF208DA6

FASTA51355,745
        10         20         30         40         50         60 
PDVIKLPYFN TMKPKKQYRR KLREEFVFIP AAALDLFDYM LALDPSKRCT AEQALQCEFL 

        70         80         90        100        110        120 
RDVEPSKMPP PDLPLWQDCH ELWSKKRRRQ KQMGMTDDLS TIKAPRKDLS LGLDDSRTST 

       130        140        150        160        170        180 
PQGVLPPAQL KSQNSSSGAP GEKQTDPSTP QQESSKSLGG VQPSQSIQPK VETDAAQAAV 

       190        200        210        220        230        240 
QSAFAVLLTQ LIKAQQSKQK DAMLEERENG SGHDAPVQLR PPPEPSTPAS GQDDLIQHQD 

       250        260        270        280        290        300 
RRILELTPEP ERPRILPPDQ RPPEPPEPPP VTEEDLDYRT ENQHGPTTSS SLTDPHAGVK 

       310        320        330        340        350        360 
AALLQLLAQH QPQDDPKREG GIDYSTGDTY VPSSDYKDNF GASFSAAPYV SSDGLGSSSA 

       370        380        390        400        410        420 
AAPLEARSFI GNSDIQSLDN YSTASSHTGG PPQTSAFTES FPSSVAGYGD IYLNAGPMLF 

       430        440        450        460        470        480 
SGDKDHRFEY SHGPITVLTN SSDPSTGPES THPLPAKIHN YNYGGNLQEN PGGPSLMHGQ 

       490        500        510 
TWTSPAQGPG YSQGYRGHIS TSAGRGRGRG LPY 

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Thymus EMBL AAH99163.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC099163 mRNA. Translation: AAH99163.1.
UniGeneRn.23420.

3D structure databases

ModBaseSearch...
MobiDBSearch...

PTM databases

PhosphoSiteQ4FZT1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:1311226. rat.

Organism-specific databases

RGD1311226. Cdk13.

Phylogenomic databases

PhylomeDBQ4FZT1.

Gene expression databases

GenevestigatorQ4FZT1.

Family and domain databases

InterProIPR011009. Kinase-like_dom.
[Graphical view]
SUPFAMSSF56112. SSF56112. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ4FZT1_RAT
AccessionPrimary (citable) accession number: Q4FZT1
Entry history
Integrated into UniProtKB/TrEMBL: August 30, 2005
Last sequence update: August 30, 2005
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)