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Q4FZE6

- Q4FZE6_MOUSE

UniProt

Q4FZE6 - Q4FZE6_MOUSE

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Protein
Submitted name:

Ribosomal protein S7

Gene
Rps7, Rps7A
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. cell differentiation Source: MGI
  2. cytoplasmic translation Source: RefGenome
  3. neural tube closure Source: MGI
  4. ribosomal small subunit biogenesis Source: RefGenome
  5. rRNA processing Source: RefGenome
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein S7Imported
Submitted name:
Ribosomal protein S7 transcript variant AImported
Gene namesi
Name:Rps7Imported
Synonyms:Rps7AImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1333818. Rps7.

Subcellular locationi

GO - Cellular componenti

  1. 90S preribosome Source: RefGenome
  2. cytosolic small ribosomal subunit Source: RefGenome
  3. ribonucleoprotein complex Source: MGI
  4. small-subunit processome Source: RefGenome
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ4FZE6.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG280542.
GeneTreeiENSGT00390000014122.
HOVERGENiHBG001698.
InParanoidiQ4FZE6.
KOiK02993.
OMAiIEVGHGK.

Family and domain databases

InterProiIPR000554. Ribosomal_S7e.
[Graphical view]
PANTHERiPTHR11278. PTHR11278. 1 hit.
PfamiPF01251. Ribosomal_S7e. 1 hit.
[Graphical view]
PROSITEiPS00948. RIBOSOMAL_S7E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4FZE6-1 [UniParc]FASTAAdd to Basket

« Hide

MFSSSAKIVK PNGEKPDEFE SGISQALLEL EMNSDLKAQL RELNITAAKE    50
IEVGGGRKAI IIFVPVPQLK SFQKIQVRLV RELEKKFSGK HVVFIAQRRI 100
LPKPTRKSRT KNKQKRPRSR TLTAVHDAIL EDLVFPSEIV GKRIRVKLDG 150
SRLIKVHLDK AQQNNVEHKV ETFSGVYKKL TGKDVNFEFP EFQL 194
Length:194
Mass (Da):22,127
Last modified:August 30, 2005 - v1
Checksum:iE21089929CC061E9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC099605 mRNA. Translation: AAH99605.1.
BC100397 mRNA. Translation: AAI00398.1.
EU349428 mRNA. Translation: ABY59727.1.
AK135520 mRNA. Translation: BAE22564.1.
AK160632 mRNA. Translation: BAE35928.1.
AK166096 mRNA. Translation: BAE38568.1.
AK169636 mRNA. Translation: BAE41268.1.
RefSeqiNP_035430.1. NM_011300.3.
UniGeneiMm.279839.
Mm.371579.

Genome annotation databases

GeneIDi20115.
KEGGimmu:20115.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC099605 mRNA. Translation: AAH99605.1 .
BC100397 mRNA. Translation: AAI00398.1 .
EU349428 mRNA. Translation: ABY59727.1 .
AK135520 mRNA. Translation: BAE22564.1 .
AK160632 mRNA. Translation: BAE35928.1 .
AK166096 mRNA. Translation: BAE38568.1 .
AK169636 mRNA. Translation: BAE41268.1 .
RefSeqi NP_035430.1. NM_011300.3.
UniGenei Mm.279839.
Mm.371579.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 20115.
KEGGi mmu:20115.

Organism-specific databases

CTDi 6201.
MGIi MGI:1333818. Rps7.

Phylogenomic databases

eggNOGi NOG280542.
GeneTreei ENSGT00390000014122.
HOVERGENi HBG001698.
InParanoidi Q4FZE6.
KOi K02993.
OMAi IEVGHGK.

Miscellaneous databases

NextBioi 297619.
SOURCEi Search...

Gene expression databases

Genevestigatori Q4FZE6.

Family and domain databases

InterProi IPR000554. Ribosomal_S7e.
[Graphical view ]
PANTHERi PTHR11278. PTHR11278. 1 hit.
Pfami PF01251. Ribosomal_S7e. 1 hit.
[Graphical view ]
PROSITEi PS00948. RIBOSOMAL_S7E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, Mullerian duct includes surrounding regionImported, ThymusImported and Whole bodyImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, Mullerian duct includes surrounding regionImported, ThymusImported and Whole bodyImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, Mullerian duct includes surrounding regionImported, ThymusImported and Whole bodyImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, Mullerian duct includes surrounding regionImported, ThymusImported and Whole bodyImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, Mullerian duct includes surrounding regionImported, ThymusImported and Whole bodyImported.
  6. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N-3Imported.
    Tissue: Mammary glandImported and Mammary tumor. MMTV-LTR/INT3 model. 5 month old mouse. Taken by biopsy.Imported.
  7. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Mullerian duct includes surrounding regionImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, ThymusImported and Whole bodyImported.
  9. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, Mullerian duct includes surrounding regionImported, ThymusImported and Whole bodyImported.
  10. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported and NODImported.
    Tissue: LungImported, Mullerian duct includes surrounding regionImported, ThymusImported and Whole bodyImported.
  11. "Isolation and characterization of the mouse ribosomal protein S7 transcript variant A (mRPS7A)."
    Duan J., Wang H.
    Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C3H/HeImported.

Entry informationi

Entry nameiQ4FZE6_MOUSE
AccessioniPrimary (citable) accession number: Q4FZE6
Entry historyi
Integrated into UniProtKB/TrEMBL: August 30, 2005
Last sequence update: August 30, 2005
Last modified: September 3, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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