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Q4FVJ6

- ARLY_PSYA2

UniProt

Q4FVJ6 - ARLY_PSYA2

Protein

Argininosuccinate lyase

Gene

argH

Organism
Psychrobacter arcticus (strain DSM 17307 / 273-4)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (30 Aug 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    2-(N(omega)-L-arginino)succinate = fumarate + L-arginine.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. argininosuccinate lyase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginine biosynthetic process via ornithine Source: InterPro

    Keywords - Molecular functioni

    Lyase

    Keywords - Biological processi

    Amino-acid biosynthesis, Arginine biosynthesis

    Enzyme and pathway databases

    BioCyciPARC259536:GI3A-90-MONOMER.
    UniPathwayiUPA00068; UER00114.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Argininosuccinate lyaseUniRule annotation (EC:4.3.2.1UniRule annotation)
    Short name:
    ASALUniRule annotation
    Alternative name(s):
    ArginosuccinaseUniRule annotation
    Gene namesi
    Name:argHUniRule annotation
    Ordered Locus Names:Psyc_0088
    OrganismiPsychrobacter arcticus (strain DSM 17307 / 273-4)
    Taxonomic identifieri259536 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaePsychrobacter
    ProteomesiUP000000546: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 457457Argininosuccinate lyasePRO_0000240756Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi259536.Psyc_0088.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4FVJ6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0165.
    HOGENOMiHOG000242744.
    KOiK01755.
    OMAiKEGIFDA.
    OrthoDBiEOG6P5ZF8.

    Family and domain databases

    Gene3Di1.10.275.10. 1 hit.
    HAMAPiMF_00006. Arg_succ_lyase.
    InterProiIPR029419. Arg_succ_lyase_C.
    IPR009049. Argininosuccinate_lyase.
    IPR024083. Fumarase/histidase_N.
    IPR020557. Fumarate_lyase_CS.
    IPR000362. Fumarate_lyase_fam.
    IPR022761. Fumarate_lyase_N.
    IPR008948. L-Aspartase-like.
    [Graphical view]
    PANTHERiPTHR11444. PTHR11444. 1 hit.
    PTHR11444:SF3. PTHR11444:SF3. 1 hit.
    PfamiPF14698. ASL_C2. 1 hit.
    PF00206. Lyase_1. 1 hit.
    [Graphical view]
    PRINTSiPR00149. FUMRATELYASE.
    SUPFAMiSSF48557. SSF48557. 1 hit.
    TIGRFAMsiTIGR00838. argH. 1 hit.
    PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4FVJ6-1 [UniParc]FASTAAdd to Basket

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    MWGGRFSEAT DSFVAAFTAS VGFDQRFARH DIQGSIAHAT MLKECSILEA    50
    DDVATIIDGL QQVLREIEAG EFNWSIALED VHMNVESRLT DIVGAVGKKL 100
    HTGRSRNDQV ATDIRLWLRE ETDNIIALLV RLQSGLLDLA EQHTDTIMPG 150
    FTHLQTAQPV SFGHHVMAWF EMLYRDTERL VDARRRINQM PLGSAALAGT 200
    TFPIDRTITA ELLGFEGICQ NSLDAVSDRD FAIEFTSAAS ILMMHMSRMS 250
    EEIILWMSAQ FNFVQIPDRF CTGSSIMPQK KNPDVPELVR GKAARVFGQL 300
    MTLLSLMKSQ PLAYNKDNQE DKEPLFDCVD TLTGSLLAFA DMLPNITPNK 350
    ENMRAATMKG YATATDLADY LVRNGVAFRD AHEVVGNAVA LGIKEGVDLS 400
    DLSLAQLQQF SNAIGDDVFD FLTLEGSLAA RDHLGGTAPN QVKQAISRGR 450
    TRLEVFA 457
    Length:457
    Mass (Da):50,505
    Last modified:August 30, 2005 - v1
    Checksum:iE87F69B91809F9C1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000082 Genomic DNA. Translation: AAZ17962.1.
    RefSeqiYP_263396.1. NC_007204.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ17962; AAZ17962; Psyc_0088.
    GeneIDi3514676.
    KEGGipar:Psyc_0088.
    PATRICi23054319. VBIPsyArc98534_0104.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000082 Genomic DNA. Translation: AAZ17962.1 .
    RefSeqi YP_263396.1. NC_007204.1.

    3D structure databases

    ProteinModelPortali Q4FVJ6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 259536.Psyc_0088.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ17962 ; AAZ17962 ; Psyc_0088 .
    GeneIDi 3514676.
    KEGGi par:Psyc_0088.
    PATRICi 23054319. VBIPsyArc98534_0104.

    Phylogenomic databases

    eggNOGi COG0165.
    HOGENOMi HOG000242744.
    KOi K01755.
    OMAi KEGIFDA.
    OrthoDBi EOG6P5ZF8.

    Enzyme and pathway databases

    UniPathwayi UPA00068 ; UER00114 .
    BioCyci PARC259536:GI3A-90-MONOMER.

    Family and domain databases

    Gene3Di 1.10.275.10. 1 hit.
    HAMAPi MF_00006. Arg_succ_lyase.
    InterProi IPR029419. Arg_succ_lyase_C.
    IPR009049. Argininosuccinate_lyase.
    IPR024083. Fumarase/histidase_N.
    IPR020557. Fumarate_lyase_CS.
    IPR000362. Fumarate_lyase_fam.
    IPR022761. Fumarate_lyase_N.
    IPR008948. L-Aspartase-like.
    [Graphical view ]
    PANTHERi PTHR11444. PTHR11444. 1 hit.
    PTHR11444:SF3. PTHR11444:SF3. 1 hit.
    Pfami PF14698. ASL_C2. 1 hit.
    PF00206. Lyase_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00149. FUMRATELYASE.
    SUPFAMi SSF48557. SSF48557. 1 hit.
    TIGRFAMsi TIGR00838. argH. 1 hit.
    PROSITEi PS00163. FUMARATE_LYASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth."
      Ayala-del-Rio H.L., Chain P.S., Grzymski J.J., Ponder M.A., Ivanova N., Bergholz P.W., Di Bartolo G., Hauser L., Land M., Bakermans C., Rodrigues D., Klappenbach J., Zarka D., Larimer F., Richardson P., Murray A., Thomashow M., Tiedje J.M.
      Appl. Environ. Microbiol. 76:2304-2312(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17307 / 273-4.

    Entry informationi

    Entry nameiARLY_PSYA2
    AccessioniPrimary (citable) accession number: Q4FVJ6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: August 30, 2005
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3