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Q4FVJ6

- ARLY_PSYA2

UniProt

Q4FVJ6 - ARLY_PSYA2

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Protein

Argininosuccinate lyase

Gene

argH

Organism
Psychrobacter arcticus (strain DSM 17307 / 273-4)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. argininosuccinate lyase activity Source: UniProtKB-EC

GO - Biological processi

  1. arginine biosynthetic process via ornithine Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Amino-acid biosynthesis, Arginine biosynthesis

Enzyme and pathway databases

BioCyciPARC259536:GI3A-90-MONOMER.
UniPathwayiUPA00068; UER00114.

Names & Taxonomyi

Protein namesi
Recommended name:
Argininosuccinate lyaseUniRule annotation (EC:4.3.2.1UniRule annotation)
Short name:
ASALUniRule annotation
Alternative name(s):
ArginosuccinaseUniRule annotation
Gene namesi
Name:argHUniRule annotation
Ordered Locus Names:Psyc_0088
OrganismiPsychrobacter arcticus (strain DSM 17307 / 273-4)
Taxonomic identifieri259536 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaePsychrobacter
ProteomesiUP000000546: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 457457Argininosuccinate lyasePRO_0000240756Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi259536.Psyc_0088.

Structurei

3D structure databases

ProteinModelPortaliQ4FVJ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0165.
HOGENOMiHOG000242744.
KOiK01755.
OMAiKEGIFDA.
OrthoDBiEOG6P5ZF8.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00006. Arg_succ_lyase.
InterProiIPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamiPF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00838. argH. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4FVJ6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MWGGRFSEAT DSFVAAFTAS VGFDQRFARH DIQGSIAHAT MLKECSILEA
60 70 80 90 100
DDVATIIDGL QQVLREIEAG EFNWSIALED VHMNVESRLT DIVGAVGKKL
110 120 130 140 150
HTGRSRNDQV ATDIRLWLRE ETDNIIALLV RLQSGLLDLA EQHTDTIMPG
160 170 180 190 200
FTHLQTAQPV SFGHHVMAWF EMLYRDTERL VDARRRINQM PLGSAALAGT
210 220 230 240 250
TFPIDRTITA ELLGFEGICQ NSLDAVSDRD FAIEFTSAAS ILMMHMSRMS
260 270 280 290 300
EEIILWMSAQ FNFVQIPDRF CTGSSIMPQK KNPDVPELVR GKAARVFGQL
310 320 330 340 350
MTLLSLMKSQ PLAYNKDNQE DKEPLFDCVD TLTGSLLAFA DMLPNITPNK
360 370 380 390 400
ENMRAATMKG YATATDLADY LVRNGVAFRD AHEVVGNAVA LGIKEGVDLS
410 420 430 440 450
DLSLAQLQQF SNAIGDDVFD FLTLEGSLAA RDHLGGTAPN QVKQAISRGR

TRLEVFA
Length:457
Mass (Da):50,505
Last modified:August 30, 2005 - v1
Checksum:iE87F69B91809F9C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000082 Genomic DNA. Translation: AAZ17962.1.
RefSeqiYP_263396.1. NC_007204.1.

Genome annotation databases

EnsemblBacteriaiAAZ17962; AAZ17962; Psyc_0088.
GeneIDi3514676.
KEGGipar:Psyc_0088.
PATRICi23054319. VBIPsyArc98534_0104.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000082 Genomic DNA. Translation: AAZ17962.1 .
RefSeqi YP_263396.1. NC_007204.1.

3D structure databases

ProteinModelPortali Q4FVJ6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 259536.Psyc_0088.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ17962 ; AAZ17962 ; Psyc_0088 .
GeneIDi 3514676.
KEGGi par:Psyc_0088.
PATRICi 23054319. VBIPsyArc98534_0104.

Phylogenomic databases

eggNOGi COG0165.
HOGENOMi HOG000242744.
KOi K01755.
OMAi KEGIFDA.
OrthoDBi EOG6P5ZF8.

Enzyme and pathway databases

UniPathwayi UPA00068 ; UER00114 .
BioCyci PARC259536:GI3A-90-MONOMER.

Family and domain databases

Gene3Di 1.10.275.10. 1 hit.
HAMAPi MF_00006. Arg_succ_lyase.
InterProi IPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view ]
PANTHERi PTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
Pfami PF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view ]
PRINTSi PR00149. FUMRATELYASE.
SUPFAMi SSF48557. SSF48557. 1 hit.
TIGRFAMsi TIGR00838. argH. 1 hit.
PROSITEi PS00163. FUMARATE_LYASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth."
    Ayala-del-Rio H.L., Chain P.S., Grzymski J.J., Ponder M.A., Ivanova N., Bergholz P.W., Di Bartolo G., Hauser L., Land M., Bakermans C., Rodrigues D., Klappenbach J., Zarka D., Larimer F., Richardson P., Murray A., Thomashow M., Tiedje J.M.
    Appl. Environ. Microbiol. 76:2304-2312(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17307 / 273-4.

Entry informationi

Entry nameiARLY_PSYA2
AccessioniPrimary (citable) accession number: Q4FVJ6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: August 30, 2005
Last modified: October 29, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3